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Aliases for DGCR11 Gene
Data sources for DGCR11 Gene:
Subcategory (RNA class) for DGCR11 Gene
lncRNA
Aliases for DGCR11 Gene
- DiGeorge Syndrome Critical Region Gene 11 (HGNC, NCBI Entrez Gene, Ensembl)
- DiGeorge Syndrome Critical Region Gene 11 (Non-Protein Coding) (HGNC, NCBI Entrez Gene)
- DGCR11 (Ensembl, LNCipedia)
- DGS-D (HGNC, NCBI Entrez Gene)
- DiGeorge Syndrome Gene D (NCBI Entrez Gene)
- NONHSAG033258.2 (NONCODE)
- HSALNG0141605 (LncBook)
External Ids for DGCR11 Gene
- HGNC: 17226
- NCBI Entrez Gene: 25786
- Ensembl: ENSG00000273311
Previous GeneCards Identifiers for DGCR11 Gene
- GC22U900002
- GC22M019033
- GC22M002654
Summaries for DGCR11 Gene
GeneCards Summary for DGCR11 Gene
DGCR11 (DiGeorge Syndrome Critical Region Gene 11) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with DGCR11 include Digeorge Syndrome and T-Cell Immunodeficiency With Thymic Aplasia.
Additional gene information for DGCR11 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for DGCR11 Gene
Genomics for DGCR11 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for DGCR11 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around DGCR11 on the GeneHancer Hub at the UCSC Golden Path
- Top Transcription factor binding sites by QIAGEN in the DGCR11 gene promoter:
-
- AML1a
- CREB
- Elk-1
- FOXF2
- HEN1
- Lmo2
- Nkx2-5
- SREBP-1a
- SREBP-1b
- SREBP-1c
Genomic Locations for DGCR11 Gene
Latest Assembly
- chr22:19,046,161-19,048,375
- (GRCh38/hg38)
- Size:
- 2,215 bases
- Orientation:
- Minus strand
Previous Assembly
- chr22:19,033,675-19,035,888
- (GRCh37/hg19 by Entrez Gene)
- Size:
- 2,214 bases
- Orientation:
- Minus strand
- chr22:19,033,675-19,035,888
- (GRCh37/hg19 by Ensembl)
- Size:
- 2,214 bases
- Orientation:
- Minus strand
Genomic View for DGCR11 Gene
Genes around DGCR11 on UCSC Golden Path with GeneCards custom track
DGCR11 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path
- Cytogenetic band:
-
- 22q11.21 by HGNC
- 22q11.21 by Entrez Gene
- 22q11.21 by Ensembl
DGCR11 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for DGCR11 Gene
Proteins for DGCR11 Gene
Post-translational modifications for DGCR11 Gene
No Post-translational modifications
No data available for DME Specific Peptides for DGCR11 Gene
Domains & Families for DGCR11 Gene
Gene Families for DGCR11 Gene
No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for DGCR11 Gene
Function for DGCR11 Gene
Phenotypes From GWAS Catalog for DGCR11 Gene
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for DGCR11 - Starting at $85 >
- * DGCR11 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
miRNA for DGCR11 Gene
- miRTarBase miRNAs that target DGCR11
Inhibitory RNAs for research
Clone products for research
- Applied Biological Materials (abm): Clones for DGCR11 - Starting at $45 >
- * DGCR11 as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Retro- | Protein Vector - Browse All
- * Viral Packaging Services and High Titer Production Services also available.
Cell Lines for research
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for DGCR11 Gene
Localization for DGCR11 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DGCR11 Gene
Transcripts for DGCR11 Gene
Non-coding RNA (ncRNA) Transcripts from RNAcentral for DGCR11 Gene
| RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
|---|---|---|---|---|
| URS00001458B9_9606 | lncRNA | 2215 | 4 |
RefSeq: NR_024157, Ensembl: ENST00000609958 (view in UCSC) , LNCipedia: DGCR11:3, NONCODE: NONHSAT083379.2, |
| URS0000E9E9F7_9606 | lncRNA | 2215 | 1 |
LncBook: HSALNT0289494, |
| URS0001BF5516_9606 | lncRNA | 2214 | 1 |
LncBook: HSALNT0289494, |
DGCR11 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path
Additional transcripts not in RNAcentral for DGCR11 Gene
- 2 NCBI additional mRNA sequence :
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for DGCR11 - Starting at $85 >
- * DGCR11 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
Inhibitory RNAs for research
Clone products for research
- Applied Biological Materials (abm): Clones for DGCR11 - Starting at $45 >
- * DGCR11 as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Retro- | Protein Vector - Browse All
- * Viral Packaging Services and High Titer Production Services also available.
Relevant External Links for DGCR11 Gene
- GeneLoc Exon Structure for
- DGCR11
Expression for DGCR11 Gene
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for DGCR11
SOURCE GeneReport for Unigene cluster for DGCR11 Gene:
Hs.720269Gene Expression Assays for research
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DGCR11 Gene
Orthologs for DGCR11 Gene
No data available for Orthologs for DGCR11 Gene
Paralogs for DGCR11 Gene
No data available for Paralogs for DGCR11 Gene
Variants for DGCR11 Gene
All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| dgv173e55 | CNV | gain | 17911159 |
| dgv174e55 | CNV | gain | 17911159 |
| dgv4473n100 | CNV | gain+loss | 25217958 |
| dgv4474n100 | CNV | gain | 25217958 |
| dgv7973n54 | CNV | gain | 21841781 |
| dgv824e214 | CNV | gain | 21293372 |
| esv2758824 | CNV | gain+loss | 17122850 |
| esv3575418 | CNV | gain | 25503493 |
| nsv1067175 | CNV | loss | 25217958 |
| nsv588213 | CNV | gain | 21841781 |
Additional Variant Information for DGCR11 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- DGCR11
SNP Genotyping and Copy Number Assays for research
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for DGCR11 Gene
Disorders for DGCR11 Gene
| Disorder | Aliases | PubMed IDs |
|---|---|---|
| digeorge syndrome |
|
|
| t-cell immunodeficiency with thymic aplasia |
|
|
Search DGCR11 in MalaCards
View complete list of genes associated with diseases
Additional Disease Information for DGCR11
No data available for UniProtKB/Swiss-Prot and Genatlas for DGCR11 Gene
Publications for DGCR11 Gene
- A transcription map of the DiGeorge and velo-cardio-facial syndrome minimal critical region on 22q11. (PMID: 8776594) Gong W … Budarf ML (Human molecular genetics 1996) 2 3
ExternalLinks
Products for DGCR11 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for DGCR11
- Origene Custom Protein Services for DGCR11
- Browse OriGene Inhibitory RNA Products For DGCR11
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for DGCR11
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For DGCR11
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for DGCR11
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for DGCR11
- Search GeneCopoeia for miRNA 3'UTR Target clone products for DGCR11
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for DGCR11
Sources for DGCR11 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB