DEPDC1P2 Gene (Pseudogene)

DEP Domain Containing 1 Pseudogene 2

GC09P105758
GIFtS:
5
See more...

Aliases for DEPDC1P2 Gene

Aliases for DEPDC1P2 Gene

  • DEP Domain Containing 1 Pseudogene 2 2 3

External Ids for DEPDC1P2 Gene

Previous GeneCards Identifiers for DEPDC1P2 Gene

  • GC09U901036
  • GC09P107561
  • GC09P108521

Summaries for DEPDC1P2 Gene

GeneCards Summary for DEPDC1P2 Gene

DEPDC1P2 (DEP Domain Containing 1 Pseudogene 2) is a Pseudogene.

Additional gene information for DEPDC1P2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for DEPDC1P2 Gene

Genomics for DEPDC1P2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for DEPDC1P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH09J105757 Enhancer 0.3 Ensembl 600.7 -0.5 -480 1.2 CEBPB DEPDC1P2 lnc-TAL2-3 ENSG00000232486 TMEM38B piR-35729-069
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around DEPDC1P2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for DEPDC1P2 Gene

Genomic Locations for DEPDC1P2 Gene
chr9:105,758,081-105,761,805
(GRCh38/hg38)
Size:
3,725 bases
Orientation:
Plus strand
chr9:108,520,329-108,523,986
(GRCh37/hg19)
Size:
3,658 bases
Orientation:
Plus strand

Genomic View for DEPDC1P2 Gene

Genes around DEPDC1P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DEPDC1P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DEPDC1P2 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for DEPDC1P2 Gene

Proteins for DEPDC1P2 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for DEPDC1P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DEPDC1P2 Gene

Domains & Families for DEPDC1P2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for DEPDC1P2 Gene

Function for DEPDC1P2 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DEPDC1P2 Gene

Localization for DEPDC1P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DEPDC1P2 Gene

Pathways & Interactions for DEPDC1P2 Gene

PathCards logo

SuperPathways for DEPDC1P2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for DEPDC1P2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for DEPDC1P2 Gene

Drugs & Compounds for DEPDC1P2 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for DEPDC1P2 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for DEPDC1P2 Gene

No ASD Table

Relevant External Links for DEPDC1P2 Gene

GeneLoc Exon Structure for
DEPDC1P2

No data available for mRNA/cDNA for DEPDC1P2 Gene

Expression for DEPDC1P2 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for DEPDC1P2 Gene

mRNA expression in normal human tissues for DEPDC1P2 Gene
mRNA expression by GTEx for DEPDC1P2 Gene

mRNA differential expression in normal tissues according to GTEx for DEPDC1P2 Gene

This gene is overexpressed in Muscle - Skeletal (x4.9).
genes like me logo Genes that share expression patterns with DEPDC1P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DEPDC1P2 Gene

Orthologs for DEPDC1P2 Gene

No data available for Orthologs and Evolution for DEPDC1P2 Gene

Paralogs for DEPDC1P2 Gene

No data available for Paralogs for DEPDC1P2 Gene

Variants for DEPDC1P2 Gene

Additional Variant Information for DEPDC1P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DEPDC1P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for DEPDC1P2 Gene

Disorders for DEPDC1P2 Gene

Additional Disease Information for DEPDC1P2

Genetic Association Database
(GAD)

No disorders were found for DEPDC1P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DEPDC1P2 Gene

Publications for DEPDC1P2 Gene

  1. Thirty new loci for age at menarche identified by a meta-analysis of genome-wide association studies. (PMID: 21102462) Elks CE … Murray A (Nature genetics 2010) 41
  2. Genome-wide association studies identify loci associated with age at menarche and age at natural menopause. (PMID: 19448621) He C … Chasman DI (Nature genetics 2009) 41
  3. Meta-analysis of genome-wide association data identifies two loci influencing age at menarche. (PMID: 19448620) Perry JR … Murabito JM (Nature genetics 2009) 41
  4. A genome-wide association study identifies protein quantitative trait loci (pQTLs). (PMID: 18464913) Melzer D … Ferrucci L (PLoS genetics 2008) 41
  5. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan RS … Benjamin EJ (BMC medical genetics 2007) 41

ExternalLinks

View latest publications for DEPDC1P2 gene in Mastermind

Products for DEPDC1P2 Gene

Sources for DEPDC1P2 Gene