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Aliases for DEFT1P Gene

Aliases for DEFT1P Gene

  • Defensin, Theta 1 Pseudogene 2 3 5
  • Defensin-Related Pseudogene 3
  • Retrocyclin Pseudogene 3
  • Circular Minidefensin 3
  • Defensin, Theta 1 2
  • Pro-Retrocyclin 3
  • Demidefensin 3
  • Retrocyclin 2
  • DEFQ1 3
  • DEFT1 3

External Ids for DEFT1P Gene

Previous HGNC Symbols for DEFT1P Gene

  • DEFQ1
  • DEFT1

Previous GeneCards Identifiers for DEFT1P Gene

  • GC00U921565
  • GC08U900587
  • GC08M006823
  • GC08M006844

Summaries for DEFT1P Gene

GeneCards Summary for DEFT1P Gene

DEFT1P (Defensin, Theta 1 Pseudogene) is a Pseudogene.

Additional gene information for DEFT1P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DEFT1P Gene

Genomics for DEFT1P Gene

Genomic Locations for DEFT1P Gene

Genomic Locations for DEFT1P Gene
2,544 bases
Minus strand

Genomic View for DEFT1P Gene

Genes around DEFT1P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DEFT1P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DEFT1P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DEFT1P Gene

No data available for GeneHancer (GH) Regulatory Elements for DEFT1P Gene

Proteins for DEFT1P Gene

Post-translational modifications for DEFT1P Gene

No Post-translational modifications

No data available for DME Specific Peptides for DEFT1P Gene

Domains & Families for DEFT1P Gene

Suggested Antigen Peptide Sequences for DEFT1P Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for DEFT1P Gene

Function for DEFT1P Gene

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DEFT1P Gene

Localization for DEFT1P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DEFT1P Gene

Pathways & Interactions for DEFT1P Gene

SuperPathways for DEFT1P Gene

No Data Available

Interacting Proteins for DEFT1P Gene

Gene Ontology (GO) - Biological Process for DEFT1P Gene


No data available for Pathways by source and SIGNOR curated interactions for DEFT1P Gene

Drugs & Compounds for DEFT1P Gene

No Compound Related Data Available

Transcripts for DEFT1P Gene

mRNA/cDNA for DEFT1P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for DEFT1P Gene

No ASD Table

Relevant External Links for DEFT1P Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for DEFT1P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DEFT1P Gene

mRNA differential expression in normal tissues according to GTEx for DEFT1P Gene

This gene is overexpressed in Whole Blood (x48.1).

NURSA nuclear receptor signaling pathways regulating expression of DEFT1P Gene:


SOURCE GeneReport for Unigene cluster for DEFT1P Gene:

genes like me logo Genes that share expression patterns with DEFT1P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DEFT1P Gene

Orthologs for DEFT1P Gene

Evolution for DEFT1P Gene

Gene Tree for DEFT1P (if available)
Gene Tree for DEFT1P (if available)

No data available for Orthologs for DEFT1P Gene

Paralogs for DEFT1P Gene

No data available for Paralogs for DEFT1P Gene

Variants for DEFT1P Gene

Sequence variations from dbSNP and Humsavar for DEFT1P Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1001163 -- 6,988,263(-) A/G non_coding_transcript_variant
rs1028369689 -- 6,991,244(-) A/T upstream_transcript_variant
rs1038367382 -- 6,990,993(-) A/G upstream_transcript_variant
rs1045942436 -- 6,990,420(-) C/T upstream_transcript_variant
rs138305127 -- 6,989,127(-) C/T intron_variant

Structural Variations from Database of Genomic Variants (DGV) for DEFT1P Gene

Variant ID Type Subtype PubMed ID
nsv950282 CNV duplication 24416366
nsv831221 CNV gain 17160897
nsv8278 CNV gain+loss 18304495
nsv820476 CNV duplication 20802225
nsv610031 CNV loss 21841781
nsv610025 CNV loss 21841781
nsv610018 CNV loss 21841781
nsv610010 CNV gain 21841781
nsv610006 CNV gain 21841781
nsv6064 CNV insertion 18451855
nsv6062 CNV insertion 18451855
nsv6060 CNV deletion 18451855
nsv528374 CNV gain 19592680
nsv527917 CNV gain 19592680
nsv515096 CNV gain 21397061
nsv471499 CNV gain 19718026
nsv465436 CNV gain 19166990
nsv437041 CNV loss 16327808
nsv435861 CNV deletion 17901297
nsv428194 CNV gain+loss 18775914
nsv22 CNV insertion 15895083
nsv21 CNV deletion 15895083
nsv1141567 CNV duplication 24896259
nsv1115772 CNV duplication 24896259
nsv1031577 CNV gain 25217958
nsv1015244 CNV gain 25217958
esv3576520 CNV gain 25503493
esv3384686 CNV duplication 20981092
esv3358388 CNV duplication 20981092
esv2764122 CNV loss 21179565
esv2761169 CNV gain+loss 21179565
esv2759589 CNV gain+loss 17122850
esv2752262 CNV gain 17911159
esv2736554 CNV deletion 23290073
esv21544 CNV gain+loss 19812545
dgv6882n100 CNV gain 25217958
dgv6881n100 CNV gain 25217958
dgv6880n100 CNV loss 25217958
dgv6879n100 CNV gain 25217958
dgv6878n100 CNV gain 25217958
dgv4043e59 CNV duplication 20981092
dgv3758n106 CNV deletion 24896259
dgv2034e212 CNV loss 25503493
dgv2033e212 CNV loss 25503493
dgv11910n54 CNV loss 21841781
dgv11909n54 CNV loss 21841781
dgv11908n54 CNV gain 21841781
dgv11907n54 CNV loss 21841781

Additional Variant Information for DEFT1P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DEFT1P Gene

Disorders for DEFT1P Gene

Additional Disease Information for DEFT1P

No disorders were found for DEFT1P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DEFT1P Gene

Publications for DEFT1P Gene

  1. Retrocyclin: a primate peptide that protects cells from infection by T- and M-tropic strains of HIV-1. (PMID: 11854483) Cole AM … Lehrer RI (Proceedings of the National Academy of Sciences of the United States of America 2002) 2 3 22 58
  2. Polymorphic segmental duplications at 8p23.1 challenge the determination of individual defensin gene repertoires and the assembly of a contiguous human reference sequence. (PMID: 15588320) Taudien S … Platzer M (BMC genomics 2004) 2 3 58
  3. Evolution of primate theta-defensins: a serpentine path to a sweet tooth. (PMID: 15019196) Nguyen TX … Lehrer RI (Peptides 2003) 2 3 58
  4. Defensins of vertebrate animals. (PMID: 11790538) Lehrer RI … Ganz T (Current opinion in immunology 2002) 3 22 58
  5. Molecular evolution of the primate α-/θ-defensin multigene family. (PMID: 24819937) Cheng DQ … Huang JF (PloS one 2014) 3 58

Products for DEFT1P Gene

Sources for DEFT1P Gene

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