Aliases for DEFB130D Gene

Aliases for DEFB130D Gene

  • Defensin Beta 130D (Pseudogene) 2 3 5
  • Beta-Defensin 130 Pseudogene 3
  • DEFB130D 5

External Ids for DEFB130D Gene

Summaries for DEFB130D Gene

GeneCards Summary for DEFB130D Gene

DEFB130D (Defensin Beta 130D (Pseudogene)) is a Pseudogene.

Additional gene information for DEFB130D Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for DEFB130D Gene

Genomics for DEFB130D Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for DEFB130D Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J009421 Enhancer 0.2 Ensembl 600.7 -0.3 -312 0.8 DEFB130D lnc-DEFB131A-2 RNA5SP153 DEFB131A USP17L30
GH04J009444 Promoter 0.3 EPDnew 0.4 +22.1 22107 0.1 DEFB131A lnc-DEFB131A-2 DEFB130D USP17L30
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around DEFB130D on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for DEFB130D Gene

Genomic Locations for DEFB130D Gene
chr4:9,422,313-9,429,702
(GRCh38/hg38)
Size:
7,390 bases
Orientation:
Plus strand
chr4:9,424,039-9,431,428
(GRCh37/hg19)
Size:
7,390 bases
Orientation:
Plus strand

Genomic View for DEFB130D Gene

Genes around DEFB130D on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DEFB130D Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DEFB130D Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DEFB130D Gene

Proteins for DEFB130D Gene

Post-translational modifications for DEFB130D Gene

No Post-translational modifications

No data available for DME Specific Peptides for DEFB130D Gene

Domains & Families for DEFB130D Gene

Gene Families for DEFB130D Gene

genes like me logo Genes that share domains with DEFB130D: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for DEFB130D Gene

Function for DEFB130D Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DEFB130D Gene

Localization for DEFB130D Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DEFB130D Gene

Pathways & Interactions for DEFB130D Gene

PathCards logo

SuperPathways for DEFB130D Gene

No Data Available

Gene Ontology (GO) - Biological Process for DEFB130D Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for DEFB130D Gene

Drugs & Compounds for DEFB130D Gene

No Compound Related Data Available

Transcripts for DEFB130D Gene

mRNA/cDNA for DEFB130D Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for DEFB130D Gene

No ASD Table

Relevant External Links for DEFB130D Gene

GeneLoc Exon Structure for
DEFB130D

Expression for DEFB130D Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DEFB130D Gene

Orthologs for DEFB130D Gene

Evolution for DEFB130D Gene

ENSEMBL:
Gene Tree for DEFB130D (if available)
TreeFam:
Gene Tree for DEFB130D (if available)

No data available for Orthologs for DEFB130D Gene

Paralogs for DEFB130D Gene

No data available for Paralogs for DEFB130D Gene

Variants for DEFB130D Gene

Additional Variant Information for DEFB130D Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DEFB130D

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for DEFB130D Gene

Disorders for DEFB130D Gene

No disorders were found for DEFB130D Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for DEFB130D Gene

Publications for DEFB130D Gene

No publications were found for DEFB130D Gene.

No data available for Mastermind for DEFB130D Gene

Products for DEFB130D Gene

Sources for DEFB130D Gene