Aliases for DEFB109A Gene

Aliases for DEFB109A Gene

  • Defensin Beta 109A (Pseudogene) 2 3 5
  • Defensin Beta 109 Pseudogene 1 2 3
  • DEFB-9 2 3
  • Defensin, Beta 109, Pseudogene 1 2
  • Defensin, Beta 9 Pseudogene 3
  • Defensin, Beta 109 2
  • DEFB109P1 3
  • DEFB109A 5
  • DEFB109 3

External Ids for DEFB109A Gene

Previous HGNC Symbols for DEFB109A Gene

  • DEFB109
  • DEFB109P1

Summaries for DEFB109A Gene

GeneCards Summary for DEFB109A Gene

DEFB109A (Defensin Beta 109A (Pseudogene)) is a Pseudogene. Among its related pathways are Defensins and Innate Immune System.

Additional gene information for DEFB109A Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for DEFB109A Gene

Genomics for DEFB109A Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for DEFB109A Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J012650 Enhancer 0.2 Ensembl 4.7 -250.4 -250435 0.4 DEFB109A piR-53609-016 LOC729732 piR-56445-009 LONRF1 FAM86B2
GH08J012391 Enhancer 0.4 Ensembl 0.4 +8.8 8765 0.4 ZIC2 ATF4 CTBP1 IKZF1 DEFB109A lnc-FAM86B2-4 piR-31534-634 FAM66A FAM86B2 DEFB130A lnc-ZNF705D-7
GH08J012402 Enhancer 0.2 Ensembl 0.7 -2.2 -2235 0.4 DEFB109A lnc-FAM86B2-4 lnc-ZNF705D-5 FAM86B2 FAM66A DEFB130A lnc-ZNF705D-7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around DEFB109A on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for DEFB109A Gene

Latest Assembly
7,158 bases
Minus strand

Previous Assembly
(GRCh37/hg19 by Entrez Gene)
7,082 bases
Minus strand

(GRCh37/hg19 by Ensembl)
7,158 bases
Minus strand

Genomic View for DEFB109A Gene

Genes around DEFB109A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DEFB109A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DEFB109A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DEFB109A Gene

Proteins for DEFB109A Gene

Post-translational modifications for DEFB109A Gene

No Post-translational modifications

No data available for DME Specific Peptides for DEFB109A Gene

Domains & Families for DEFB109A Gene

Gene Families for DEFB109A Gene

Suggested Antigen Peptide Sequences for DEFB109A Gene

GenScript: Design optimal peptide antigens:
  • Defensin, beta 109 (DB109_HUMAN)
genes like me logo Genes that share domains with DEFB109A: view

No data available for Protein Domains , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for DEFB109A Gene

Function for DEFB109A Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DEFB109A Gene

Localization for DEFB109A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DEFB109A Gene

Pathways & Interactions for DEFB109A Gene

PathCards logo

SuperPathways for DEFB109A Gene

genes like me logo Genes that share pathways with DEFB109A: view

Pathways by source for DEFB109A Gene

Gene Ontology (GO) - Biological Process for DEFB109A Gene


No data available for Interacting Proteins and SIGNOR curated interactions for DEFB109A Gene

Drugs & Compounds for DEFB109A Gene

No Compound Related Data Available

Transcripts for DEFB109A Gene

mRNA/cDNA for DEFB109A Gene

1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for DEFB109A Gene

No ASD Table

Relevant External Links for DEFB109A Gene

GeneLoc Exon Structure for

Expression for DEFB109A Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for DEFB109A

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DEFB109A Gene

Orthologs for DEFB109A Gene

Evolution for DEFB109A Gene

Gene Tree for DEFB109A (if available)
Gene Tree for DEFB109A (if available)
Alliance of Genome Resources:
Additional Orthologs for DEFB109A

No data available for Orthologs for DEFB109A Gene

Paralogs for DEFB109A Gene

No data available for Paralogs for DEFB109A Gene

Variants for DEFB109A Gene

Structural Variations from Database of Genomic Variants (DGV) for DEFB109A Gene

Variant ID Type Subtype PubMed ID
dgv11911n54 CNV loss 21841781
dgv11967n54 CNV gain 21841781
dgv11968n54 CNV gain 21841781
dgv1270e199 CNV deletion 23128226
dgv1376e214 CNV gain 21293372
dgv140n17 CNV loss 16327808
dgv154e203 CNV gain+loss 21179565
dgv2035e212 CNV gain 25503493
dgv244e55 CNV gain 17911159
dgv245e55 CNV gain 17911159
dgv246e55 CNV gain 17911159
dgv263n111 CNV deletion 26073780
dgv264n111 CNV duplication 26073780
dgv3775n106 CNV deletion 24896259
dgv6878n100 CNV gain 25217958
dgv6879n100 CNV gain 25217958
dgv6882n100 CNV gain 25217958
dgv6884n100 CNV gain 25217958
dgv6885n100 CNV gain 25217958
dgv6887n100 CNV loss 25217958
dgv6888n100 CNV gain+loss 25217958
dgv6889n100 CNV loss 25217958
dgv6890n100 CNV gain 25217958
dgv6891n100 CNV gain+loss 25217958
dgv6892n100 CNV loss 25217958
dgv6893n100 CNV gain 25217958
dgv6894n100 CNV gain+loss 25217958
dgv6895n100 CNV loss 25217958
dgv6896n100 CNV gain+loss 25217958
dgv6897n100 CNV gain 25217958
dgv6898n100 CNV loss 25217958
dgv6899n100 CNV gain 25217958
dgv6900n100 CNV gain+loss 25217958
dgv6901n100 CNV gain+loss 25217958
dgv6902n100 CNV gain 25217958
dgv6903n100 CNV loss 25217958
dgv6904n100 CNV gain 25217958
dgv6905n100 CNV gain 25217958
dgv6906n100 CNV gain 25217958
dgv6907n100 CNV loss 25217958
dgv6908n100 CNV gain 25217958
dgv6909n100 CNV gain 25217958
dgv6910n100 CNV gain+loss 25217958
dgv6911n100 CNV loss 25217958
dgv6912n100 CNV loss 25217958
dgv7015n100 CNV gain 25217958
dgv7016n100 CNV gain 25217958
dgv7017n100 CNV gain 25217958
dgv7018n100 CNV gain+loss 25217958
dgv7019n100 CNV gain 25217958
dgv7020n100 CNV loss 25217958
dgv7021n100 CNV loss 25217958
dgv7025n100 CNV gain 25217958
dgv7026n100 CNV gain+loss 25217958
dgv7030n100 CNV gain 25217958
dgv7031n100 CNV loss 25217958
dgv7032n100 CNV gain 25217958
dgv7033n100 CNV gain 25217958
dgv7034n100 CNV gain+loss 25217958
dgv7035n100 CNV loss 25217958
dgv7036n100 CNV gain 25217958
dgv7037n100 CNV loss 25217958
dgv7039n100 CNV gain+loss 25217958
dgv7040n100 CNV gain 25217958
dgv7043n100 CNV gain 25217958
dgv7044n100 CNV loss 25217958
dgv7045n100 CNV gain+loss 25217958
dgv7046n100 CNV gain+loss 25217958
dgv7047n100 CNV gain+loss 25217958
dgv7048n100 CNV loss 25217958
dgv7049n100 CNV gain 25217958
dgv7050n100 CNV gain+loss 25217958
dgv7051n100 CNV gain 25217958
dgv7052n100 CNV gain+loss 25217958
dgv7053n100 CNV loss 25217958
dgv7054n100 CNV gain 25217958
dgv7055n100 CNV gain+loss 25217958
dgv7056n100 CNV gain 25217958
dgv7057n100 CNV loss 25217958
dgv7058n100 CNV loss 25217958
dgv7059n100 CNV loss 25217958
dgv7060n100 CNV loss 25217958
dgv7061n100 CNV loss 25217958
dgv7062n100 CNV loss 25217958
dgv7063n100 CNV gain+loss 25217958
dgv7064n100 CNV loss 25217958
dgv7065n100 CNV gain+loss 25217958
dgv7066n100 CNV gain 25217958
dgv7067n100 CNV loss 25217958
esv21583 CNV gain+loss 19812545
esv25198 CNV gain+loss 19812545
esv2672709 CNV deletion 23128226
esv2675221 CNV deletion 23128226
esv2736614 CNV deletion 23290073
esv2759589 CNV gain+loss 17122850
esv2759593 CNV gain+loss 17122850
esv2761169 CNV gain+loss 21179565
esv2764098 CNV gain+loss 21179565
esv33606 CNV gain+loss 17666407
esv3616114 CNV loss 21293372
esv3616274 CNV loss 21293372
esv3891318 CNV gain 25118596
esv3891324 CNV gain 25118596
esv3891341 CNV gain 25118596
nsv1020906 CNV loss 25217958
nsv1023986 CNV loss 25217958
nsv1026778 CNV gain 25217958
nsv1027709 CNV gain+loss 25217958
nsv1028208 CNV loss 25217958
nsv1029157 CNV gain 25217958
nsv1031577 CNV gain 25217958
nsv1032964 CNV gain 25217958
nsv1034659 CNV loss 25217958
nsv1076047 CNV deletion 25765185
nsv1115781 CNV duplication 24896259
nsv1144219 CNV deletion 24896259
nsv1161709 CNV duplication 26073780
nsv1161710 CNV deletion 26073780
nsv1161723 CNV duplication 26073780
nsv428194 CNV gain+loss 18775914
nsv428195 CNV gain 18775914
nsv469553 CNV loss 16826518
nsv471650 CNV gain+loss 15918152
nsv471652 CNV gain+loss 15918152
nsv508495 CNV deletion 20534489
nsv509249 CNV insertion 20534489
nsv510977 OTHER complex 20534489
nsv511387 CNV loss 21212237
nsv515099 CNV gain 21397061
nsv515968 CNV gain+loss 19592680
nsv516685 CNV gain+loss 19592680
nsv821656 CNV gain 15273396
nsv821657 CNV loss 15273396
nsv8281 CNV gain+loss 18304495
nsv8288 CNV gain+loss 18304495
nsv831223 CNV loss 17160897
nsv831224 CNV gain+loss 17160897
nsv831225 CNV loss 17160897
nsv831234 CNV loss 17160897
nsv831235 CNV loss 17160897
nsv951091 CNV deletion 24416366
nsv951106 CNV deletion 24416366
nsv981904 CNV duplication 23825009
nsv981913 CNV duplication 23825009

Additional Variant Information for DEFB109A Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
Leiden Open Variation Database (LOVD)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance and Variation tolerance for DEFB109A Gene

Disorders for DEFB109A Gene

Additional Disease Information for DEFB109A

No disorders were found for DEFB109A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DEFB109A Gene

Publications for DEFB109A Gene

  1. Discovery of five conserved beta -defensin gene clusters using a computational search strategy. (PMID: 11854508) Schutte BC … McCray PB (Proceedings of the National Academy of Sciences of the United States of America 2002) 2 3
  2. Cross-species analysis of the mammalian beta-defensin gene family: presence of syntenic gene clusters and preferential expression in the male reproductive tract. (PMID: 16033865) Patil AA … Zhang G (Physiological genomics 2005) 3
  3. Duplication and selection in the evolution of primate beta-defensin genes. (PMID: 12734011) Semple CA … Dorin JR (Genome biology 2003) 3
  4. ORFeome-based search of airway epithelial cell-specific novel human [beta]-defensin genes. (PMID: 12600824) Kao CY … Wu R (American journal of respiratory cell and molecular biology 2003) 3

Products for DEFB109A Gene

Sources for DEFB109A Gene