Aliases for DDX39BP2 Gene

Aliases for DDX39BP2 Gene

  • DEAD-Box Helicase 39B Pseudogene 2 2 3 5
  • DEAD (Asp-Glu-Ala-Asp) Box Polypeptide 39B Pseudogene 2 2 3
  • HLA-B Associated Transcript 1 Pseudogene 2 2 3
  • BPG309N1.15 3
  • BAT1P2 3

External Ids for DDX39BP2 Gene

Previous HGNC Symbols for DDX39BP2 Gene

  • BAT1P2

Previous GeneCards Identifiers for DDX39BP2 Gene

  • GC06U902184
  • GC06P029970
  • GC06P029996
  • GC06P030188
  • GC06P030221
  • GC06P030259
  • GC06P032258
  • GC06P032432
  • GC06P030358
  • GC06P030506
  • GC06P030713
  • GC06P030871
  • GC06P031030
  • GC06P031181
  • GC06P031363
  • GC06P031961

Summaries for DDX39BP2 Gene

GeneCards Summary for DDX39BP2 Gene

DDX39BP2 (DEAD-Box Helicase 39B Pseudogene 2) is a Pseudogene.

Additional gene information for DDX39BP2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for DDX39BP2 Gene

Genomics for DDX39BP2 Gene

GeneHancer (GH) Regulatory Elements for DDX39BP2 Gene

Promoters and enhancers for DDX39BP2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J029993 Enhancer 0.5 Ensembl ENCODE 750.6 -0.2 -208 0.8 FOSL1 JUND DDX39BP2 lnc-HLA-A-6 ENSG00000237669 ZNRD1 TRIM31-AS1 TRIM31 ABCF1 HLA-J MICD HCG4B
GH06J029976 Promoter/Enhancer 1.8 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -16.7 -16709 3 ZNF785 ZBTB40 CTCF RBPJ SMARCE1 POLR2A ATF1 CREB1 MIXL1 L3MBTL2 MICD HCG9 HLA-J ENSG00000237669 ZNRD1 HLA-K HLA-A ZFP57 HLA-H ENSG00000230521
GH06J029991 Enhancer 0.4 Ensembl 0.6 -2.0 -2008 0.4 NR2C2 MEF2D CEBPG ENSG00000237669 ZFP57 ZNRD1 TRIM31-AS1 TRIM31 DDX39BP2 lnc-HLA-A-6 MICD HCG4B
GH06J029981 Enhancer 0.5 Ensembl 0.4 -11.0 -11008 1.6 ZIC2 PRDM10 ZSCAN4 E4F1 NFATC1 ZNRD1 ZNRD1ASP HCG4 ENSG00000237669 HLA-A GTF2H4 PPP1R10 TRIM26 HLA-H MDC1
GH06J029989 Enhancer 0.2 Ensembl 0.6 -3.9 -3908 0.2 ZNRD1 ZNRD1ASP HLA-H TRIM31-AS1 TRIM31 DDX39BP2 lnc-HLA-A-6 MICD HCG4B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around DDX39BP2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for DDX39BP2 Gene

Genomic Locations for DDX39BP2 Gene
chr6:29,993,209-29,994,133
(GRCh38/hg38)
Size:
925 bases
Orientation:
Plus strand
chr6:29,960,986-29,961,910
(GRCh37/hg19)
Size:
925 bases
Orientation:
Plus strand

Genomic View for DDX39BP2 Gene

Genes around DDX39BP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DDX39BP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DDX39BP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for DDX39BP2 Gene

Post-translational modifications for DDX39BP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DDX39BP2 Gene

Domains & Families for DDX39BP2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for DDX39BP2 Gene

Function for DDX39BP2 Gene

Phenotypes From GWAS Catalog for DDX39BP2 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DDX39BP2 Gene

Localization for DDX39BP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DDX39BP2 Gene

Pathways & Interactions for DDX39BP2 Gene

PathCards logo

SuperPathways for DDX39BP2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for DDX39BP2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DDX39BP2 Gene

Drugs & Compounds for DDX39BP2 Gene

No Compound Related Data Available

Transcripts for DDX39BP2 Gene

mRNA/cDNA for DDX39BP2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for DDX39BP2 Gene

No ASD Table

Relevant External Links for DDX39BP2 Gene

GeneLoc Exon Structure for
DDX39BP2
ECgene alternative splicing isoforms for
DDX39BP2

Expression for DDX39BP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DDX39BP2 Gene

NURSA nuclear receptor signaling pathways regulating expression of DDX39BP2 Gene:

DDX39BP2
genes like me logo Genes that share expression patterns with DDX39BP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DDX39BP2 Gene

Orthologs for DDX39BP2 Gene

Evolution for DDX39BP2 Gene

ENSEMBL:
Gene Tree for DDX39BP2 (if available)
TreeFam:
Gene Tree for DDX39BP2 (if available)

No data available for Orthologs for DDX39BP2 Gene

Paralogs for DDX39BP2 Gene

No data available for Paralogs for DDX39BP2 Gene

Variants for DDX39BP2 Gene

Additional Variant Information for DDX39BP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DDX39BP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for DDX39BP2 Gene

Disorders for DDX39BP2 Gene

No disorders were found for DDX39BP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for DDX39BP2 Gene

Publications for DDX39BP2 Gene

No publications were found for DDX39BP2 Gene.

Products for DDX39BP2 Gene

Sources for DDX39BP2 Gene