Aliases for DDIT4-AS1 Gene

Subcategory (RNA class) for DDIT4-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for DDIT4-AS1 Gene

  • DDIT4 Antisense RNA 1 2 3 5
  • DDIT4-AS1 2 168
  • RP11-442H21.2 3
  • NONHSAG006173 92
  • HSALNG0078773 167

External Ids for DDIT4-AS1 Gene

Summaries for DDIT4-AS1 Gene

GeneCards Summary for DDIT4-AS1 Gene

DDIT4-AS1 (DDIT4 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for DDIT4-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for DDIT4-AS1 Gene

Genomics for DDIT4-AS1 Gene

GeneHancer (GH) Regulatory Elements for DDIT4-AS1 Gene

Promoters and enhancers for DDIT4-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J072270 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 500.7 +1.2 1213 8.5 EP300 ZNF217 CTCF ZSCAN5C SIN3A NRF1 TCF12 POLR2G USF1 SP1 DDIT4 DDIT4-AS1 lnc-ASCC1-4 ECD DNAJB12 RPL17P50 FAM149B1 ENSG00000227540 DNAJC9 ANAPC16
GH10J072285 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -7.9 -7920 7.8 ZBTB40 NCOR1 RELA MCM3 RBM25 ZNF384 SPI1 REPIN1 BCOR CBX1 DNAJB12 ECD ASCC1 DDIT4-AS1 HSALNG0078775
GH10J072279 Enhancer 0.6 Ensembl dbSUPER 0.7 -3.6 -3621 0.4 ZNF34 ZFP69B ZEB2 ZNF770 DNAJB12 DDIT4-AS1 HSALNG0078775
GH10J072290 Enhancer 1 ENCODE dbSUPER 0.4 -15.2 -15203 0.7 NRF1 HES1 MYC CTBP1 TRIM25 RBM25 RELA MBD2 SP2 MYNN HSALNG0078775 DDIT4-AS1
GH10J072291 Enhancer 1 ENCODE dbSUPER 0.4 -16.7 -16673 1.9 ZIC2 RFX1 CTBP1 CTCF FOS NR3C1 FOSL2 ZNF592 EHMT2 BATF DNAJB12 ENSG00000272630 HSALNG0078775 DDIT4-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around DDIT4-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for DDIT4-AS1 Gene

Genomic Locations for DDIT4-AS1 Gene
chr10:72,274,914-72,275,980
(GRCh38/hg38)
Size:
1,067 bases
Orientation:
Minus strand
chr10:74,034,673-74,035,738
(GRCh37/hg19)
Size:
1,066 bases
Orientation:
Minus strand

Genomic View for DDIT4-AS1 Gene

Genes around DDIT4-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DDIT4-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DDIT4-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for DDIT4-AS1 Gene

Proteins for DDIT4-AS1 Gene

Post-translational modifications for DDIT4-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DDIT4-AS1 Gene

Domains & Families for DDIT4-AS1 Gene

Gene Families for DDIT4-AS1 Gene

genes like me logo Genes that share domains with DDIT4-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for DDIT4-AS1 Gene

Function for DDIT4-AS1 Gene

Phenotypes From GWAS Catalog for DDIT4-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DDIT4-AS1 Gene

Localization for DDIT4-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DDIT4-AS1 Gene

Pathways & Interactions for DDIT4-AS1 Gene

PathCards logo

SuperPathways for DDIT4-AS1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for DDIT4-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for DDIT4-AS1 Gene

Drugs & Compounds for DDIT4-AS1 Gene

No Compound Related Data Available

Transcripts for DDIT4-AS1 Gene

mRNA/cDNA for DDIT4-AS1 Gene

2 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for DDIT4-AS1 Gene

No ASD Table

Relevant External Links for DDIT4-AS1 Gene

GeneLoc Exon Structure for
DDIT4-AS1

Expression for DDIT4-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DDIT4-AS1 Gene

Orthologs for DDIT4-AS1 Gene

Evolution for DDIT4-AS1 Gene

ENSEMBL:
Gene Tree for DDIT4-AS1 (if available)
TreeFam:
Gene Tree for DDIT4-AS1 (if available)

No data available for Orthologs for DDIT4-AS1 Gene

Paralogs for DDIT4-AS1 Gene

No data available for Paralogs for DDIT4-AS1 Gene

Variants for DDIT4-AS1 Gene

Additional Variant Information for DDIT4-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DDIT4-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for DDIT4-AS1 Gene

Disorders for DDIT4-AS1 Gene

No disorders were found for DDIT4-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for DDIT4-AS1 Gene

Publications for DDIT4-AS1 Gene

  1. Bronchial Epithelial Cells from Cystic Fibrosis Patients Express a Specific Long Non-coding RNA Signature upon Pseudomonas aeruginosa Infection. (PMID: 28611953) Balloy V … Scaria V (Frontiers in cellular and infection microbiology 2017) 2 3 54

Products for DDIT4-AS1 Gene

Sources for DDIT4-AS1 Gene