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Aliases for DDC-AS1 Gene

Subcategory (RNA class) for DDC-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for DDC-AS1 Gene

  • DDC Antisense RNA 1 2 3 5

External Ids for DDC-AS1 Gene

Summaries for DDC-AS1 Gene

GeneCards Summary for DDC-AS1 Gene

DDC-AS1 (DDC Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for DDC-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DDC-AS1 Gene

Genomics for DDC-AS1 Gene

GeneHancer (GH) Regulatory Elements for DDC-AS1 Gene

Promoters and enhancers for DDC-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J050528 Enhancer 1 Ensembl ENCODE 657.6 -1.4 -1378 4.7 ELF3 FOXA2 DMAP1 BMI1 BATF RAD21 YY1 FOS RCOR1 RXRA DDC-AS1 FIGNL1 DDC GC07P050457 PIR58617
GH07J050553 Promoter/Enhancer 1.7 EPDnew ENCODE dbSUPER 6.5 +26.0 26016 7.6 PKNOX1 FOXA2 MLX ARNT ZFP64 ARID4B DMAP1 YY1 ZNF766 SP5 DDC FIGNL1 DDC-AS1
GH07J050533 Enhancer 1.4 FANTOM5 Ensembl ENCODE 7.6 +3.0 3030 3.3 PKNOX1 ATF1 ARNT SIN3A BRCA1 TCF12 ZNF766 CBX5 GATA2 E2F8 FIGNL1 DDC DDC-AS1
GH07J050613 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 6.4 +83.3 83342 2.9 FOXA2 ZNF48 RAD21 RARA NCOA2 YY1 CREM RXRA ELF1 REST FIGNL1 DDC-AS1 DDC GC07M050654 GRB10
GH07J050584 Enhancer 0.8 ENCODE dbSUPER 6.4 +53.5 53497 0.6 SMARCE1 ZNF687 NFIB DPF2 ZNF217 GATA3 CTBP1 CUX1 FIGNL1 DDC-AS1 DDC GC07M050654
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around DDC-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for DDC-AS1 Gene

Genomic Locations for DDC-AS1 Gene
chr7:50,531,759-50,543,463
(GRCh38/hg38)
Size:
11,705 bases
Orientation:
Plus strand
chr7:50,599,457-50,611,161
(GRCh37/hg19)

Genomic View for DDC-AS1 Gene

Genes around DDC-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DDC-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DDC-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DDC-AS1 Gene

Function for DDC-AS1 Gene

Phenotypes From GWAS Catalog for DDC-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DDC-AS1 Gene

Localization for DDC-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DDC-AS1 Gene

Pathways & Interactions for DDC-AS1 Gene

SuperPathways for DDC-AS1 Gene

No Data Available

Interacting Proteins for DDC-AS1 Gene

Gene Ontology (GO) - Biological Process for DDC-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DDC-AS1 Gene

Drugs & Compounds for DDC-AS1 Gene

No Compound Related Data Available

Transcripts for DDC-AS1 Gene

mRNA/cDNA for DDC-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for DDC-AS1 Gene

No ASD Table

Relevant External Links for DDC-AS1 Gene

GeneLoc Exon Structure for
DDC-AS1
ECgene alternative splicing isoforms for
DDC-AS1

Expression for DDC-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DDC-AS1 Gene

genes like me logo Genes that share expression patterns with DDC-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DDC-AS1 Gene

Orthologs for DDC-AS1 Gene

Evolution for DDC-AS1 Gene

ENSEMBL:
Gene Tree for DDC-AS1 (if available)
TreeFam:
Gene Tree for DDC-AS1 (if available)

No data available for Orthologs for DDC-AS1 Gene

Paralogs for DDC-AS1 Gene

No data available for Paralogs for DDC-AS1 Gene

Variants for DDC-AS1 Gene

Sequence variations from dbSNP and Humsavar for DDC-AS1 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs11575302 likely-benign, Deficiency of aromatic-L-amino-acid decarboxylase 50,539,996(+) G/A non_coding_transcript_variant
rs137853207 pathogenic, Deficiency of aromatic-L-amino-acid decarboxylase 50,539,926(+) C/T non_coding_transcript_variant
rs137853211 pathogenic, Deficiency of aromatic-L-amino-acid decarboxylase 50,539,958(+) G/A non_coding_transcript_variant
rs373041067 uncertain-significance, not specified, Deficiency of aromatic-L-amino-acid decarboxylase 50,537,854(+) C/A intron_variant
rs377528325 uncertain-significance, Deficiency of aromatic-L-amino-acid decarboxylase 50,537,929(+) G/A/C/T intron_variant

Structural Variations from Database of Genomic Variants (DGV) for DDC-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv1286e214 CNV gain 21293372
nsv1015758 CNV gain 25217958
nsv1016665 CNV gain 25217958

Additional Variant Information for DDC-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DDC-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DDC-AS1 Gene

Disorders for DDC-AS1 Gene

Additional Disease Information for DDC-AS1

No disorders were found for DDC-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DDC-AS1 Gene

Publications for DDC-AS1 Gene

  1. An atlas of genetic influences on human blood metabolites. (PMID: 24816252) Shin SY … Soranzo N (Nature genetics 2014) 3 58
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for DDC-AS1 Gene

Sources for DDC-AS1 Gene

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