Aliases for DCST1-AS1 Gene

Subcategory (RNA class) for DCST1-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for DCST1-AS1 Gene

  • DCST1 Antisense RNA 1 2 3 5
  • DCST1-AS1 2 168
  • RP11-307C12.11 3
  • HSALNG0007463 167
  • NONHSAG003044 92

External Ids for DCST1-AS1 Gene

Summaries for DCST1-AS1 Gene

GeneCards Summary for DCST1-AS1 Gene

DCST1-AS1 (DCST1 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with DCST1-AS1 include Ovarian Cancer.

Additional gene information for DCST1-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for DCST1-AS1 Gene

Genomics for DCST1-AS1 Gene

GeneHancer (GH) Regulatory Elements for DCST1-AS1 Gene

Promoters and enhancers for DCST1-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around DCST1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for DCST1-AS1 Gene

Genomic Locations for DCST1-AS1 Gene
chr1:155,036,159-155,063,991
(GRCh38/hg38)
Size:
27,833 bases
Orientation:
Minus strand
chr1:155,017,667-155,036,419
(GRCh37/hg19)
Size:
18,753 bases
Orientation:
Minus strand

Genomic View for DCST1-AS1 Gene

Genes around DCST1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DCST1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DCST1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DCST1-AS1 Gene

Proteins for DCST1-AS1 Gene

Post-translational modifications for DCST1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DCST1-AS1 Gene

Domains & Families for DCST1-AS1 Gene

Gene Families for DCST1-AS1 Gene

genes like me logo Genes that share domains with DCST1-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for DCST1-AS1 Gene

Function for DCST1-AS1 Gene

Phenotypes From GWAS Catalog for DCST1-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DCST1-AS1 Gene

Localization for DCST1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DCST1-AS1 Gene

Pathways & Interactions for DCST1-AS1 Gene

PathCards logo

SuperPathways for DCST1-AS1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for DCST1-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for DCST1-AS1 Gene

Drugs & Compounds for DCST1-AS1 Gene

No Compound Related Data Available

Transcripts for DCST1-AS1 Gene

mRNA/cDNA for DCST1-AS1 Gene

17 RNACentral transcripts :
2 REFSEQ mRNAs :
6 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
6 NONCODE transcripts :
9 LncBook transcripts :
14 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for DCST1-AS1 Gene

No ASD Table

Relevant External Links for DCST1-AS1 Gene

GeneLoc Exon Structure for
DCST1-AS1

Expression for DCST1-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for DCST1-AS1

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DCST1-AS1 Gene

Orthologs for DCST1-AS1 Gene

Evolution for DCST1-AS1 Gene

ENSEMBL:
Gene Tree for DCST1-AS1 (if available)
TreeFam:
Gene Tree for DCST1-AS1 (if available)

No data available for Orthologs for DCST1-AS1 Gene

Paralogs for DCST1-AS1 Gene

No data available for Paralogs for DCST1-AS1 Gene

Variants for DCST1-AS1 Gene

Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for DCST1-AS1 Gene

SNP ID Clinical significance and condition Chr 01 pos Variation AA Info Type
770116 Benign: not provided 155,055,974(-) C/A MISSENSE_VARIANT,NON_CODING_TRANSCRIPT_VARIANT
777560 Benign: not provided 155,058,704(-) G/T INTRON_VARIANT
rs483352774 Uncertain Significance: not provided 155,061,444(-) C/T MISSENSE_VARIANT,NON_CODING_TRANSCRIPT_VARIANT,SYNONYMOUS_VARIANT,INTRON_VARIANT

Additional dbSNP identifiers (rs#s) for DCST1-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for DCST1-AS1 Gene

Variant ID Type Subtype PubMed ID
esv3587615 CNV gain 21293372
esv3587616 CNV gain 21293372
nsv509502 CNV insertion 20534489
nsv524157 CNV loss 19592680
nsv952212 CNV deletion 24416366

Additional Variant Information for DCST1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DCST1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DCST1-AS1 Gene

Disorders for DCST1-AS1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for DCST1-AS1 Gene - From: LncRNADisease and DISEASES

Disorder Aliases PubMed IDs
ovarian cancer
  • ovarian cancer, somatic
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for DCST1-AS1

genes like me logo Genes that share disorders with DCST1-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for DCST1-AS1 Gene

Publications for DCST1-AS1 Gene

  1. LncRNA DCST1-AS1 accelerates the proliferation, metastasis and autophagy of hepatocellular carcinoma cell by AKT/mTOR signaling pathways. (PMID: 31364110) Li J … Tan QF (European review for medical and pharmacological sciences 2019) 2 3 54
  2. Integrated bioinformatics analysis of chromatin regulator EZH2 in regulating mRNA and lncRNA expression by ChIP sequencing and RNA sequencing. (PMID: 27835578) Li Y … He J (Oncotarget 2016) 2 3 54
  3. LncRNA DCST1-AS1 functions as a competing endogenous RNA to regulate FAIM2 expression by sponging miR-1254 in hepatocellular carcinoma. (PMID: 30617187) Chen J … An Y (Clinical science (London, England : 1979) 2019) 3 54
  4. Identification of 23 new prostate cancer susceptibility loci using the iCOGS custom genotyping array. (PMID: 23535732) Eeles RA … Easton DF (Nature genetics 2013) 3 54
  5. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 54

Products for DCST1-AS1 Gene

Sources for DCST1-AS1 Gene