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Aliases for DBH-AS1 Gene

Subcategory (RNA class) for DBH-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for DBH-AS1 Gene

  • DBH Antisense RNA 1 2 3 5
  • DBH Antisense RNA 1 (Non-Protein Coding) 2 3
  • Non-Protein Coding RNA 118 2
  • NCRNA00118 3
  • BPR 3

External Ids for DBH-AS1 Gene

Previous HGNC Symbols for DBH-AS1 Gene

  • NCRNA00118

Previous GeneCards Identifiers for DBH-AS1 Gene

  • GC09U901708
  • GC09M136522

Summaries for DBH-AS1 Gene

GeneCards Summary for DBH-AS1 Gene

DBH-AS1 (DBH Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class. Diseases associated with DBH-AS1 include Neuroblastoma and Hepatocellular Carcinoma.

Additional gene information for DBH-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DBH-AS1 Gene

Genomics for DBH-AS1 Gene

GeneHancer (GH) Regulatory Elements for DBH-AS1 Gene

Promoters and enhancers for DBH-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J133659 Enhancer 1 Ensembl 660 -1.3 -1344 0.9 FOXA2 ARID4B SIN3A FEZF1 ZNF48 ETS1 YY1 GLIS2 KLF7 PAF1 DBH-AS1 GC09M133655 DBH
GH09J133658 Enhancer 0.4 ENCODE 650.7 -0.2 -226 0.2 ZNF366 ZNF169 ZNF398 DBH-AS1 ENSG00000273249 GC09M133655 DBH
GH09J133656 Enhancer 0.3 ENCODE 650.7 +0.8 774 0.2 SCRT2 DBH-AS1 GC09M133655 DBH
GH09J133657 Enhancer 0.2 ENCODE 660.8 +0.3 274 0.2 DBH-AS1 LCN1P1 GC09M133655 DBH
GH09J133713 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 13.5 -57.6 -57639 3.5 FOXA2 MLX ZFP64 ARID4B DMAP1 ZNF48 ETS1 YY1 FOS NFKBIZ SARDH DBH-AS1 GC09P133683
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around DBH-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for DBH-AS1 Gene

Genomic Locations for DBH-AS1 Gene
chr9:133,654,586-133,657,408
(GRCh38/hg38)
Size:
2,823 bases
Orientation:
Minus strand
chr9:136,519,220-136,522,435
(GRCh37/hg19)
Size:
3,216 bases
Orientation:
Minus strand

Genomic View for DBH-AS1 Gene

Genes around DBH-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DBH-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DBH-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DBH-AS1 Gene

Proteins for DBH-AS1 Gene

Post-translational modifications for DBH-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DBH-AS1 Gene

Domains & Families for DBH-AS1 Gene

Gene Families for DBH-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with DBH-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DBH-AS1 Gene

Function for DBH-AS1 Gene

Phenotypes From GWAS Catalog for DBH-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DBH-AS1 Gene

Localization for DBH-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DBH-AS1 Gene

Pathways & Interactions for DBH-AS1 Gene

SuperPathways for DBH-AS1 Gene

No Data Available

Interacting Proteins for DBH-AS1 Gene

Gene Ontology (GO) - Biological Process for DBH-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DBH-AS1 Gene

Drugs & Compounds for DBH-AS1 Gene

No Compound Related Data Available

Transcripts for DBH-AS1 Gene

mRNA/cDNA for DBH-AS1 Gene

(6) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(2) RNA Central transcripts :

Unigene Clusters for DBH-AS1 Gene

DBH antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DBH-AS1 Gene

No ASD Table

Relevant External Links for DBH-AS1 Gene

GeneLoc Exon Structure for
DBH-AS1
ECgene alternative splicing isoforms for
DBH-AS1

Expression for DBH-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DBH-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for DBH-AS1 Gene

This gene is overexpressed in Liver (x23.2).

SOURCE GeneReport for Unigene cluster for DBH-AS1 Gene:

Hs.223858
genes like me logo Genes that share expression patterns with DBH-AS1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DBH-AS1 Gene

Orthologs for DBH-AS1 Gene

Evolution for DBH-AS1 Gene

ENSEMBL:
Gene Tree for DBH-AS1 (if available)
TreeFam:
Gene Tree for DBH-AS1 (if available)

No data available for Orthologs for DBH-AS1 Gene

Paralogs for DBH-AS1 Gene

No data available for Paralogs for DBH-AS1 Gene

Variants for DBH-AS1 Gene

Sequence variations from dbSNP and Humsavar for DBH-AS1 Gene

SNP ID Clin Chr 09 pos Variation AA Info Type
rs129882 benign, Dopamine beta hydroxylase deficiency 133,658,547(-) C/T upstream_transcript_variant
rs129914 likely-benign, Dopamine beta hydroxylase deficiency 133,658,725(-) T/C upstream_transcript_variant
rs13306304 likely-benign, Dopamine beta hydroxylase deficiency 133,658,837(-) G/A upstream_transcript_variant
rs140355168 uncertain-significance, Dopamine beta hydroxylase deficiency 133,658,765(-) C/A upstream_transcript_variant
rs141570582 uncertain-significance, Dopamine beta hydroxylase deficiency 133,658,418(-) G/A upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for DBH-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2739138 CNV deletion 23290073
esv3576711 CNV gain 25503493
nsv1125319 OTHER inversion 24896259
nsv466619 CNV loss 19166990
nsv615640 CNV loss 21841781
nsv951800 CNV deletion 24416366

Additional Variant Information for DBH-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DBH-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DBH-AS1 Gene

Disorders for DBH-AS1 Gene

MalaCards: The human disease database

(2) MalaCards diseases for DBH-AS1 Gene - From: LncRNADisease and DISEASES

Disorder Aliases PubMed IDs
neuroblastoma
  • neuroblastoma, susceptibility to
hepatocellular carcinoma
  • hcc
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for DBH-AS1

genes like me logo Genes that share disorders with DBH-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for DBH-AS1 Gene

Publications for DBH-AS1 Gene

  1. HBx-related long non-coding RNA DBH-AS1 promotes cell proliferation and survival by activating MAPK signaling in hepatocellular carcinoma. (PMID: 26393879) Huang JL … Wang Q (Oncotarget 2015) 2 3 58
  2. Physical and cDNA mapping in the DBH region of human chromosome 9q34. (PMID: 10686491) Gilbert JR … Pericak-Vance MA (Human heredity 2000) 2 3 58
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for DBH-AS1 Gene

Sources for DBH-AS1 Gene

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