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Aliases for DBF4P1 Gene

Subcategory (RNA class) for DBF4P1 Gene

lncRNA

Aliases for DBF4P1 Gene

  • DBF4 Zinc Finger Pseudogene 1 2 3 5
  • DBF4 Homolog Pseudogene 1 2 3
  • HCG2024596 3

External Ids for DBF4P1 Gene

ORGUL Members for DBF4P1 Gene

Previous GeneCards Identifiers for DBF4P1 Gene

  • GC10M065930

Summaries for DBF4P1 Gene

GeneCards Summary for DBF4P1 Gene

DBF4P1 (DBF4 Zinc Finger Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for DBF4P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DBF4P1 Gene

Genomics for DBF4P1 Gene

GeneHancer (GH) Regulatory Elements for DBF4P1 Gene

Promoters and enhancers for DBF4P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I063264 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 23.5 +903.0 903048 7 FEZF1 DMAP1 IRF4 YY1 ZNF213 E2F8 ZNF143 SP3 MEF2D ZNF610 JMJD1C DBF4P1 RPL7AP50 JMJD1C-AS1 NRBF2 MRPL35P2 GC10M063245 GC10P063350
GH10I063519 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE 10.6 +649.0 648964 5.2 HDGF PKNOX1 FOXA2 ARNT SIN3A DMAP1 ZNF2 ZNF766 CBX5 ZNF213 JMJD1C REEP3 JMJD1C-AS1 DBF4P1 NRBF2 GC10P063512 GC10M063572
GH10I064040 Enhancer 1.1 Ensembl ENCODE 12.6 +129.4 129422 1.2 HDGF FOXA2 ARNT SIN3A ZNF2 IRF4 ZNF48 CBX5 ZNF213 ARID2 JMJD1C DBF4P1 RPL7AP50 LOC105378333 PIR46921 LOC105378332
GH10I063798 Enhancer 0.6 Ensembl ENCODE 4.7 +371.6 371570 1.9 JUN GABPB1 GABPA DBF4P1 GC10P063782 GC10P063843 ENSG00000228566
GH10I064173 Enhancer 0.3 ENCODE 0.8 -3.1 -3105 0.2 GATA3 DBF4P1 LOC105378334
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around DBF4P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for DBF4P1 Gene

Genomic Locations for DBF4P1 Gene
chr10:64,168,953-64,170,850
(GRCh38/hg38)
Size:
1,898 bases
Orientation:
Minus strand
chr10:65,928,714-65,930,611
(GRCh37/hg19)

Genomic View for DBF4P1 Gene

Genes around DBF4P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DBF4P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DBF4P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DBF4P1 Gene

Proteins for DBF4P1 Gene

Post-translational modifications for DBF4P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DBF4P1 Gene

Domains & Families for DBF4P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DBF4P1 Gene

Function for DBF4P1 Gene

Phenotypes From GWAS Catalog for DBF4P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DBF4P1 Gene

Localization for DBF4P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DBF4P1 Gene

Pathways & Interactions for DBF4P1 Gene

SuperPathways for DBF4P1 Gene

No Data Available

Interacting Proteins for DBF4P1 Gene

Gene Ontology (GO) - Biological Process for DBF4P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DBF4P1 Gene

Drugs & Compounds for DBF4P1 Gene

No Compound Related Data Available

Transcripts for DBF4P1 Gene

mRNA/cDNA for DBF4P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for DBF4P1 Gene

No ASD Table

Relevant External Links for DBF4P1 Gene

GeneLoc Exon Structure for
DBF4P1
ECgene alternative splicing isoforms for
DBF4P1

Expression for DBF4P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DBF4P1 Gene

mRNA differential expression in normal tissues according to GTEx for DBF4P1 Gene

This gene is overexpressed in Testis (x12.1).

NURSA nuclear receptor signaling pathways regulating expression of DBF4P1 Gene:

DBF4P1
genes like me logo Genes that share expression patterns with DBF4P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DBF4P1 Gene

Orthologs for DBF4P1 Gene

Evolution for DBF4P1 Gene

ENSEMBL:
Gene Tree for DBF4P1 (if available)
TreeFam:
Gene Tree for DBF4P1 (if available)

No data available for Orthologs for DBF4P1 Gene

Paralogs for DBF4P1 Gene

No data available for Paralogs for DBF4P1 Gene

Variants for DBF4P1 Gene

Additional Variant Information for DBF4P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DBF4P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for DBF4P1 Gene

Disorders for DBF4P1 Gene

No disorders were found for DBF4P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for DBF4P1 Gene

Publications for DBF4P1 Gene

  1. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 58

Products for DBF4P1 Gene

Sources for DBF4P1 Gene

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