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Aliases for DAPK1-IT1 Gene

Subcategory (RNA class) for DAPK1-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for DAPK1-IT1 Gene

  • DAPK1 Intronic Transcript 1 2 3 5
  • DAPK1 Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for DAPK1-IT1 Gene

Previous GeneCards Identifiers for DAPK1-IT1 Gene

  • GC09P090170

Summaries for DAPK1-IT1 Gene

GeneCards Summary for DAPK1-IT1 Gene

DAPK1-IT1 (DAPK1 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for DAPK1-IT1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DAPK1-IT1 Gene

Genomics for DAPK1-IT1 Gene

GeneHancer (GH) Regulatory Elements for DAPK1-IT1 Gene

Promoters and enhancers for DAPK1-IT1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I087551 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 550.8 -1.5 -1511 1.1 HDAC1 PKNOX1 ATF1 ARNT ZBTB40 TCF12 ZNF766 GATA2 ATF7 CREM DAPK1-IT1 DAPK1 RPS29P18
GH09I087554 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.8 +2.3 2259 3.4 HDAC1 RFX1 L3MBTL2 SOX6 NR2F1 CEBPB EBF1 ZEB2 CEBPG KLF5 DAPK1 CTSL DAPK1-IT1 GC09P087601
GH09I087568 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +17.1 17093 4.4 CLOCK FOXA2 MLX ZFP64 ARID4B FEZF1 DMAP1 ZNF48 ETS1 YY1 DAPK1 DAPK1-IT1 GC09P087601
GH09I087592 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +43.8 43791 10.3 FOXA2 FEZF1 ZNF2 YY1 GTF3C2 TCF12 ATF7 FOS RXRA JUNB DAPK1 CTSL GC09P087601 DAPK1-IT1
GH09I087535 Enhancer 1.1 ENCODE dbSUPER 0.4 -17.1 -17131 2.6 HDGF HDAC1 PKNOX1 SMAD1 RB1 BMI1 BATF KLF5 IRF4 ZNF207 DAPK1 RPS29P18 DAPK1-IT1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around DAPK1-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for DAPK1-IT1 Gene

Genomic Locations for DAPK1-IT1 Gene
chr9:87,553,454-87,554,459
(GRCh38/hg38)
Size:
1,006 bases
Orientation:
Plus strand
chr9:90,168,369-90,169,374
(GRCh37/hg19)

Genomic View for DAPK1-IT1 Gene

Genes around DAPK1-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DAPK1-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DAPK1-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for DAPK1-IT1 Gene

Proteins for DAPK1-IT1 Gene

Post-translational modifications for DAPK1-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DAPK1-IT1 Gene

Domains & Families for DAPK1-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DAPK1-IT1 Gene

Function for DAPK1-IT1 Gene

Phenotypes From GWAS Catalog for DAPK1-IT1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DAPK1-IT1 Gene

Localization for DAPK1-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DAPK1-IT1 Gene

Pathways & Interactions for DAPK1-IT1 Gene

SuperPathways for DAPK1-IT1 Gene

No Data Available

Interacting Proteins for DAPK1-IT1 Gene

Gene Ontology (GO) - Biological Process for DAPK1-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DAPK1-IT1 Gene

Drugs & Compounds for DAPK1-IT1 Gene

No Compound Related Data Available

Transcripts for DAPK1-IT1 Gene

mRNA/cDNA for DAPK1-IT1 Gene

(3) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DAPK1-IT1 Gene

DAPK1 intronic transcript 1 (non-protein coding):
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for DAPK1-IT1 Gene

No ASD Table

Relevant External Links for DAPK1-IT1 Gene

GeneLoc Exon Structure for
DAPK1-IT1
ECgene alternative splicing isoforms for
DAPK1-IT1

Expression for DAPK1-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DAPK1-IT1 Gene

SOURCE GeneReport for Unigene cluster for DAPK1-IT1 Gene:

Hs.656160
genes like me logo Genes that share expression patterns with DAPK1-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DAPK1-IT1 Gene

Orthologs for DAPK1-IT1 Gene

Evolution for DAPK1-IT1 Gene

ENSEMBL:
Gene Tree for DAPK1-IT1 (if available)
TreeFam:
Gene Tree for DAPK1-IT1 (if available)

No data available for Orthologs for DAPK1-IT1 Gene

Paralogs for DAPK1-IT1 Gene

No data available for Paralogs for DAPK1-IT1 Gene

Variants for DAPK1-IT1 Gene

Additional Variant Information for DAPK1-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DAPK1-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for DAPK1-IT1 Gene

Disorders for DAPK1-IT1 Gene

Additional Disease Information for DAPK1-IT1

No disorders were found for DAPK1-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DAPK1-IT1 Gene

Publications for DAPK1-IT1 Gene

  1. Long noncoding intronic RNAs are differentially expressed in primary and metastatic pancreatic cancer. (PMID: 22078386) Tahira AC … Reis EM (Molecular cancer 2011) 2 3 58

Products for DAPK1-IT1 Gene

Sources for DAPK1-IT1 Gene

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