Aliases for DAOA-AS1 Gene

Subcategory (RNA class) for DAOA-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for DAOA-AS1 Gene

  • DAOA Antisense RNA 1 2 3 5
  • DAOA Antisense RNA 1 (Non-Protein Coding) 2 3
  • G30 Transcript 2 3
  • DAOA-AS1 2 168
  • DAOA Antisense RNA (Non-Protein Coding) 2
  • Putative Protein LG30 3
  • NONHSAG014127 92
  • HSALNG0099122 167
  • DAOA-AS 3
  • DAOAAS 3
  • G30 3

External Ids for DAOA-AS1 Gene

Previous HGNC Symbols for DAOA-AS1 Gene

  • DAOAAS
  • DAOA-AS

Previous GeneCards Identifiers for DAOA-AS1 Gene

  • GC13U900811
  • GC13M106112

Summaries for DAOA-AS1 Gene

GeneCards Summary for DAOA-AS1 Gene

DAOA-AS1 (DAOA Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with DAOA-AS1 include Panic Disorder and Bipolar Disorder.

Gene Wiki entry for DAOA-AS1 Gene

Rfam classification for DAOA-AS1 Gene

  • DAOA antisense RNA 1 conserved region 2
  • DAOA antisense RNA 1 conserved region 1

Additional gene information for DAOA-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , PharmGKB "VIP" Summary and piRNA Summary for DAOA-AS1 Gene

Genomics for DAOA-AS1 Gene

GeneHancer (GH) Regulatory Elements for DAOA-AS1 Gene

Promoters and enhancers for DAOA-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J105474 Enhancer 0.6 Ensembl ENCODE 0.3 +30.5 30481 1.2 GATA3 SPI1 RCOR1 CHD2 YY1 GATA2 DAOA DAOA-AS1
GH13J105510 Enhancer 0.3 Ensembl 0.4 -5.4 -5419 1.8 GATA2 DAOA-AS1 HSALNG0099123
GH13J105464 Enhancer 0.4 Ensembl ENCODE 0.3 +40.6 40571 1.6 FOS DAOA ENSG00000275502 DAOA-AS1
GH13J105501 Enhancer 0.2 Ensembl 0.7 +3.7 3681 1.2 DAOA-AS1 DAOA
GH13J105491 Enhancer 0.2 Ensembl 0.4 +14.3 14281 0.8 DAOA-AS1 DAOA
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around DAOA-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for DAOA-AS1 Gene

Genomic Locations for DAOA-AS1 Gene
chr13:105,459,055-105,505,682
(GRCh38/hg38)
Size:
46,628 bases
Orientation:
Minus strand
chr13:106,111,404-106,158,030
(GRCh37/hg19)
Size:
46,627 bases
Orientation:
Minus strand

Genomic View for DAOA-AS1 Gene

Genes around DAOA-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DAOA-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DAOA-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DAOA-AS1 Gene

Proteins for DAOA-AS1 Gene

Post-translational modifications for DAOA-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DAOA-AS1 Gene

Domains & Families for DAOA-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for DAOA-AS1 Gene

Function for DAOA-AS1 Gene

Phenotypes From GWAS Catalog for DAOA-AS1 Gene

Phenotypes for DAOA-AS1 Gene

genes like me logo Genes that share phenotypes with DAOA-AS1: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DAOA-AS1 Gene

Localization for DAOA-AS1 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for DAOA-AS1 gene
Compartment Confidence
plasma membrane 1
extracellular 1
cytoskeleton 1
mitochondrion 1
nucleus 1
cytosol 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DAOA-AS1 Gene

Pathways & Interactions for DAOA-AS1 Gene

PathCards logo

SuperPathways for DAOA-AS1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for DAOA-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for DAOA-AS1 Gene

Drugs & Compounds for DAOA-AS1 Gene

No Compound Related Data Available

Transcripts for DAOA-AS1 Gene

mRNA/cDNA for DAOA-AS1 Gene

3 RNACentral transcripts :
1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 NONCODE transcripts :
2 LncBook transcripts :
2 LNCipedia transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for DAOA-AS1 Gene

No ASD Table

Relevant External Links for DAOA-AS1 Gene

GeneLoc Exon Structure for
DAOA-AS1

Expression for DAOA-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for DAOA-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for DAOA-AS1 Gene

This gene is overexpressed in Testis (x44.6) and Brain - Cortex (x8.3).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for DAOA-AS1

SOURCE GeneReport for Unigene cluster for DAOA-AS1 Gene:

Hs.558713
genes like me logo Genes that share expression patterns with DAOA-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DAOA-AS1 Gene

Orthologs for DAOA-AS1 Gene

Evolution for DAOA-AS1 Gene

ENSEMBL:
Gene Tree for DAOA-AS1 (if available)
TreeFam:
Gene Tree for DAOA-AS1 (if available)

No data available for Orthologs for DAOA-AS1 Gene

Paralogs for DAOA-AS1 Gene

No data available for Paralogs for DAOA-AS1 Gene

Variants for DAOA-AS1 Gene

Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for DAOA-AS1 Gene

SNP ID Clinical significance and condition Chr 13 pos Variation AA Info Type
736608 Likely Benign: not provided 105,472,627(-) A/C MISSENSE_VARIANT,SYNONYMOUS_VARIANT
768627 Benign: not provided 105,472,644(-) A/T MISSENSE_VARIANT,SYNONYMOUS_VARIANT
768628 Benign: not provided 105,472,693(-) T/C INTRON_VARIANT
768629 Benign: not provided 105,490,025(-) C/G MISSENSE_VARIANT
rs2391191 Not Provided: not provided 105,467,097(-) G/A MISSENSE_VARIANT,FIVE_PRIME_UTR_VARIANT

Additional dbSNP identifiers (rs#s) for DAOA-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for DAOA-AS1 Gene

Variant ID Type Subtype PubMed ID
esv275034 CNV gain+loss 21479260
esv3633445 CNV loss 21293372
nsv1048036 CNV gain 25217958
nsv1052425 CNV loss 25217958
nsv1168 CNV insertion 18451855
nsv519018 CNV loss 19592680
nsv524222 CNV loss 19592680
nsv562996 CNV gain 21841781

Additional Variant Information for DAOA-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DAOA-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DAOA-AS1 Gene

Disorders for DAOA-AS1 Gene

MalaCards: The human disease database

(4) MalaCards diseases for DAOA-AS1 Gene - From: LncRNADisease, DISEASES, and GeneCards

Disorder Aliases PubMed IDs
panic disorder
  • panic disorder 1
bipolar disorder
  • major affective disorder 1
schizophrenia
  • sczd
bare lymphocyte syndrome, type i
  • bls, type i
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for DAOA-AS1

genes like me logo Genes that share disorders with DAOA-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for DAOA-AS1 Gene

Publications for DAOA-AS1 Gene

  1. Polymorphisms at the G72/G30 gene locus, on 13q33, are associated with bipolar disorder in two independent pedigree series. (PMID: 12647258) Hattori E … Gershon ES (American journal of human genetics 2003) 2 3 54
  2. Genetic and physiological data implicating the new human gene G72 and the gene for D-amino acid oxidase in schizophrenia. (PMID: 12364586) Chumakov I … Realson J (Proceedings of the National Academy of Sciences of the United States of America 2002) 2 3 54
  3. Expression of the G72/G30 gene in transgenic mice induces behavioral changes. (PMID: 23337943) Cheng L … Liu C (Molecular psychiatry 2014) 3 54
  4. Association study of NRG1, DTNBP1, RGS4, G72/G30, and PIP5K2A with schizophrenia and symptom severity in a Hungarian sample. (PMID: 19937977) Réthelyi JM … Bitter I (American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics 2010) 3 54
  5. Behavioral changes in G72/G30 transgenic mice. (PMID: 19189879) Otte DM … Zimmer A (European neuropsychopharmacology : the journal of the European College of Neuropsychopharmacology 2009) 3 54

Products for DAOA-AS1 Gene

Sources for DAOA-AS1 Gene