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Aliases for CZ1P-ASNS Gene

Subcategory (RNA class) for CZ1P-ASNS Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for CZ1P-ASNS Gene

  • CZ1P-ASNS Readthrough 3

External Ids for CZ1P-ASNS Gene

Summaries for CZ1P-ASNS Gene

Entrez Gene Summary for CZ1P-ASNS Gene

  • This locus represents naturally occurring readthrough transcription between the neighboring CCZ1P (CCZ1 homolog, vacuolar protein trafficking and biogenesis associated pseudogene) and ASNS (asparagine synthetase) genes on chromosome 7. The readthrough transcript is a candidate for nonsense-mediated mRNA decay (NMD), and is unlikely to produce a protein product. [provided by RefSeq, Jun 2017]

GeneCards Summary for CZ1P-ASNS Gene

CZ1P-ASNS (CZ1P-ASNS Readthrough) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for CZ1P-ASNS Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CZ1P-ASNS Gene

Genomics for CZ1P-ASNS Gene

Genomic Locations for CZ1P-ASNS Gene

Genomic Locations for CZ1P-ASNS Gene
chr7:-
(GRCh38/hg38)
Orientation:
Unknown strand

Genomic View for CZ1P-ASNS Gene


Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for CZ1P-ASNS Gene

No data available for GeneHancer (GH) Regulatory Elements for CZ1P-ASNS Gene

Proteins for CZ1P-ASNS Gene

Post-translational modifications for CZ1P-ASNS Gene

No Post-translational modifications

No data available for DME Specific Peptides for CZ1P-ASNS Gene

Domains & Families for CZ1P-ASNS Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CZ1P-ASNS Gene

Function for CZ1P-ASNS Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CZ1P-ASNS Gene

Localization for CZ1P-ASNS Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CZ1P-ASNS Gene

Pathways & Interactions for CZ1P-ASNS Gene

SuperPathways for CZ1P-ASNS Gene

No Data Available

Interacting Proteins for CZ1P-ASNS Gene

Gene Ontology (GO) - Biological Process for CZ1P-ASNS Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CZ1P-ASNS Gene

Drugs & Compounds for CZ1P-ASNS Gene

No Compound Related Data Available

Transcripts for CZ1P-ASNS Gene

mRNA/cDNA for CZ1P-ASNS Gene

(1) REFSEQ mRNAs :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for CZ1P-ASNS Gene

No ASD Table

Expression for CZ1P-ASNS Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CZ1P-ASNS Gene

Orthologs for CZ1P-ASNS Gene

No data available for Orthologs and Evolution for CZ1P-ASNS Gene

Paralogs for CZ1P-ASNS Gene

No data available for Paralogs for CZ1P-ASNS Gene

Variants for CZ1P-ASNS Gene

Sequence variations from dbSNP and Humsavar for CZ1P-ASNS Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000038000 -- 97,922,117(-) C/A intron_variant
rs1000153565 -- 97,919,724(-) A/G intron_variant
rs1000167448 -- 97,908,287(-) A/C downstream_transcript_variant
rs1000470597 -- 97,916,964(-) A/T intron_variant
rs1000522544 -- 97,910,396(-) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for CZ1P-ASNS Gene

Disorders for CZ1P-ASNS Gene

Additional Disease Information for CZ1P-ASNS

No disorders were found for CZ1P-ASNS Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CZ1P-ASNS Gene

Publications for CZ1P-ASNS Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58
  2. Toward a complete human genome sequence. (PMID: 9847074) Sanger Center … Genome Sequencing Center (Genome research 1998) 3 58

Products for CZ1P-ASNS Gene

Sources for CZ1P-ASNS Gene

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