Aliases for CYP4F62P Gene

Aliases for CYP4F62P Gene

  • Cytochrome P450 Family 4 Subfamily F Member 62, Pseudogene 2 3 5
  • Cytochrome P450, Family 4, Subfamily F, Polypeptide 43, Pseudogene 2 3
  • Cytochrome P450, Family 4, Subfamily F, Polypeptide 62, Pseudogene 2 3
  • CYP4F-Se11[6:7:8] 2 3
  • Uncharacterized Protein C2orf14-Like 1 3
  • CYP4F43P 3
  • CYP4F62P 5

External Ids for CYP4F62P Gene

Previous HGNC Symbols for CYP4F62P Gene

  • CYP4F43P

Previous GeneCards Identifiers for CYP4F62P Gene

  • GC02M131188

Summaries for CYP4F62P Gene

GeneCards Summary for CYP4F62P Gene

CYP4F62P (Cytochrome P450 Family 4 Subfamily F Member 62, Pseudogene) is a Pseudogene.

Additional gene information for CYP4F62P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CYP4F62P Gene

Genomics for CYP4F62P Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for CYP4F62P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J130428 Promoter 1.1 Ensembl CraniofacialAtlas 5 +13.5 13480 2 REST ELF1 CTCF SMARCA4 NRF1 FOXP1 GMEB1 GTF2F1 RNF2 CTBP1 KLF2P2 lnc-PTPN18-3 PTPN18 CYP4F62P FAR2P2 lnc-POTEI-2 POTEI
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CYP4F62P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for CYP4F62P Gene

Latest Assembly
chr2:130,429,827-130,441,681
(GRCh38/hg38)
Size:
11,855 bases
Orientation:
Minus strand

Previous Assembly
chr2:131,193,235-131,199,254
(GRCh37/hg19 by Entrez Gene)
Size:
6,020 bases
Orientation:
Minus strand

chr2:131,187,400-131,199,048
(GRCh37/hg19 by Ensembl)
Size:
11,649 bases
Orientation:
Minus strand

Genomic View for CYP4F62P Gene

Genes around CYP4F62P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CYP4F62P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CYP4F62P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CYP4F62P Gene

Proteins for CYP4F62P Gene

Post-translational modifications for CYP4F62P Gene

No Post-translational modifications

No data available for DME Specific Peptides for CYP4F62P Gene

Domains & Families for CYP4F62P Gene

Gene Families for CYP4F62P Gene

genes like me logo Genes that share domains with CYP4F62P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CYP4F62P Gene

Function for CYP4F62P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CYP4F62P Gene

Localization for CYP4F62P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CYP4F62P Gene

Pathways & Interactions for CYP4F62P Gene

PathCards logo

SuperPathways for CYP4F62P Gene

No Data Available

Gene Ontology (GO) - Biological Process for CYP4F62P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CYP4F62P Gene

Drugs & Compounds for CYP4F62P Gene

No Compound Related Data Available

Transcripts for CYP4F62P Gene

mRNA/cDNA for CYP4F62P Gene

2 NCBI additional mRNA sequence :
3 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CYP4F62P Gene

No ASD Table

Relevant External Links for CYP4F62P Gene

GeneLoc Exon Structure for
CYP4F62P

Expression for CYP4F62P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CYP4F62P Gene

mRNA differential expression in normal tissues according to GTEx for CYP4F62P Gene

This gene is overexpressed in Testis (x29.6), Prostate (x10.0), and Heart - Atrial Appendage (x9.0).
genes like me logo Genes that share expression patterns with CYP4F62P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CYP4F62P Gene

Orthologs for CYP4F62P Gene

Evolution for CYP4F62P Gene

ENSEMBL:
Gene Tree for CYP4F62P (if available)
TreeFam:
Gene Tree for CYP4F62P (if available)
Alliance of Genome Resources:
Additional Orthologs for CYP4F62P

No data available for Orthologs for CYP4F62P Gene

Paralogs for CYP4F62P Gene

No data available for Paralogs for CYP4F62P Gene

Variants for CYP4F62P Gene

Structural Variations from Database of Genomic Variants (DGV) for CYP4F62P Gene

Variant ID Type Subtype PubMed ID
dgv2032n106 OTHER inversion 24896259
dgv7083n54 CNV loss 21841781
esv2759092 CNV gain+loss 17122850
esv3893326 CNV gain 25118596
nsv1005664 CNV loss 25217958
nsv1078468 CNV duplication 25765185
nsv1132509 CNV duplication 24896259
nsv1141362 CNV duplication 24896259
nsv1146033 CNV duplication 26484159
nsv1147463 OTHER inversion 26484159
nsv428403 CNV loss 18775914
nsv7327 OTHER inversion 18451855
nsv961644 CNV duplication 23825009
nsv979119 CNV duplication 23825009
nsv998333 CNV gain+loss 25217958

Additional Variant Information for CYP4F62P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CYP4F62P
Leiden Open Variation Database (LOVD)
CYP4F62P

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance and Variation tolerance for CYP4F62P Gene

Disorders for CYP4F62P Gene

Additional Disease Information for CYP4F62P

No disorders were found for CYP4F62P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CYP4F62P Gene

Publications for CYP4F62P Gene

  1. Generation and annotation of the DNA sequences of human chromosomes 2 and 4. (PMID: 15815621) Hillier LW … Wilson RK (Nature 2005) 3
  2. Circular rapid amplification of cDNA ends for high-throughput extension cloning of partial genes. (PMID: 15203218) Fu GK … Stuve LL (Genomics 2004) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

Products for CYP4F62P Gene

Sources for CYP4F62P Gene