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Aliases for CYP4A22-AS1 Gene

Subcategory (RNA class) for CYP4A22-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for CYP4A22-AS1 Gene

  • CYP4A22 Antisense RNA 1 2 3 5
  • CYP4A22 Antisense RNA 1 (Non-Protein Coding) 2 3
  • NcRNA-A3 3

External Ids for CYP4A22-AS1 Gene

Previous GeneCards Identifiers for CYP4A22-AS1 Gene

  • GC01M047562

Summaries for CYP4A22-AS1 Gene

GeneCards Summary for CYP4A22-AS1 Gene

CYP4A22-AS1 (CYP4A22 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for CYP4A22-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CYP4A22-AS1 Gene

Genomics for CYP4A22-AS1 Gene

GeneHancer (GH) Regulatory Elements for CYP4A22-AS1 Gene

Promoters and enhancers for CYP4A22-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I047178 Promoter/Enhancer 1.8 Ensembl ENCODE dbSUPER 550.8 -1.6 -1591 4.5 HDGF PKNOX1 SMAD1 ARNT ARID4B SIN3A YBX1 DMAP1 POLR2B ZNF766 LINC00853 CYP4A22-AS1 PDZK1IP1 EFCAB14-AS1 TAL1 LRRC41 ENSG00000226252 MOB3C CYP4B1 ENSG00000225028
GH01I047322 Enhancer 0.9 ENCODE dbSUPER 10.1 -145.4 -145435 3.6 HDAC1 ELF3 SMAD5 SOX6 HLF CEBPB FEZF1 THRB PRDM6 FOXK2 GC01M047322 ENSG00000226252 CMPK1 TAL1 CYP4A22-AS1 LINC00853 FOXE3 GC01P047330
GH01I047477 Enhancer 0.9 ENCODE 9.2 -298.7 -298691 1.5 PKNOX1 CLOCK FOXA2 MLX ARID4B ZNF48 YY1 SLC30A9 RXRA SP5 FOXD2-AS1 FOXD2 LINC01389 FOXE3 CYP4A22-AS1 LINC00853 ENSG00000271355 GC01M047436
GH01I047253 Enhancer 0.7 ENCODE 11 -75.0 -74958 1.4 SOX13 SAP130 ZNF384 CEBPG ETS1 TEAD3 ATF7 NR2F6 CREM GATAD2A TAL1 ENSG00000226252 CMPK1 LINC00853 CYP4A22-AS1 FOXD2 FOXD2-AS1 GC01M047285 STIL
GH01I047107 Enhancer 0.7 Ensembl ENCODE 10.7 +71.1 71147 2 GABPB1 CEBPG HNF4A PRDM1 CYP4A22 LINC00853 CYP4A22-AS1 CYP4Z1 GC01M047099 LOC100533626
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CYP4A22-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CYP4A22-AS1 Gene

Genomic Locations for CYP4A22-AS1 Gene
chr1:47,096,653-47,179,271
(GRCh38/hg38)
Size:
82,619 bases
Orientation:
Minus strand
chr1:47,562,325-47,644,943
(GRCh37/hg19)

Genomic View for CYP4A22-AS1 Gene

Genes around CYP4A22-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CYP4A22-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CYP4A22-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for CYP4A22-AS1 Gene

Proteins for CYP4A22-AS1 Gene

Post-translational modifications for CYP4A22-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CYP4A22-AS1 Gene

Domains & Families for CYP4A22-AS1 Gene

Gene Families for CYP4A22-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CYP4A22-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CYP4A22-AS1 Gene

Function for CYP4A22-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CYP4A22-AS1 Gene

Localization for CYP4A22-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CYP4A22-AS1 Gene

Pathways & Interactions for CYP4A22-AS1 Gene

SuperPathways for CYP4A22-AS1 Gene

No Data Available

Interacting Proteins for CYP4A22-AS1 Gene

Gene Ontology (GO) - Biological Process for CYP4A22-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CYP4A22-AS1 Gene

Drugs & Compounds for CYP4A22-AS1 Gene

No Compound Related Data Available

Transcripts for CYP4A22-AS1 Gene

mRNA/cDNA for CYP4A22-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CYP4A22-AS1 Gene

No ASD Table

Relevant External Links for CYP4A22-AS1 Gene

GeneLoc Exon Structure for
CYP4A22-AS1
ECgene alternative splicing isoforms for
CYP4A22-AS1

Expression for CYP4A22-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CYP4A22-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for CYP4A22-AS1 Gene

This gene is overexpressed in Kidney - Cortex (x16.2).
genes like me logo Genes that share expression patterns with CYP4A22-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CYP4A22-AS1 Gene

Orthologs for CYP4A22-AS1 Gene

Evolution for CYP4A22-AS1 Gene

ENSEMBL:
Gene Tree for CYP4A22-AS1 (if available)
TreeFam:
Gene Tree for CYP4A22-AS1 (if available)

No data available for Orthologs for CYP4A22-AS1 Gene

Paralogs for CYP4A22-AS1 Gene

No data available for Paralogs for CYP4A22-AS1 Gene

Variants for CYP4A22-AS1 Gene

Additional Variant Information for CYP4A22-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CYP4A22-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CYP4A22-AS1 Gene

Disorders for CYP4A22-AS1 Gene

No disorders were found for CYP4A22-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CYP4A22-AS1 Gene

Publications for CYP4A22-AS1 Gene

  1. Long noncoding RNAs with enhancer-like function in human cells. (PMID: 20887892) Ørom UA … Shiekhattar R (Cell 2010) 2 3 58

Products for CYP4A22-AS1 Gene

Sources for CYP4A22-AS1 Gene

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