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Aliases for CYP17A1-AS1 Gene

Subcategory (RNA class) for CYP17A1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for CYP17A1-AS1 Gene

  • CYP17A1 Antisense RNA 1 2 3 5
  • Cytochrome P450, Family 17, Subfamily A, Polypeptide 1 Opposite Strand 2 3
  • CYP17A1 Antisense RNA 1 (Non-Protein Coding) 2 3
  • BA753C18.3 3
  • CYP17A1OS 3

External Ids for CYP17A1-AS1 Gene

Previous HGNC Symbols for CYP17A1-AS1 Gene

  • CYP17A1OS

Previous GeneCards Identifiers for CYP17A1-AS1 Gene

  • GC10U901552
  • GC10P104593

Summaries for CYP17A1-AS1 Gene

GeneCards Summary for CYP17A1-AS1 Gene

CYP17A1-AS1 (CYP17A1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for CYP17A1-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CYP17A1-AS1 Gene

Genomics for CYP17A1-AS1 Gene

GeneHancer (GH) Regulatory Elements for CYP17A1-AS1 Gene

Promoters and enhancers for CYP17A1-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I102833 Enhancer 1 ENCODE dbSUPER 550.8 +1.7 1719 1.2 PKNOX1 ARID4B KLF17 BATF ZNF2 IRF4 RAD21 CBX5 ARID2 ZNF143 CYP17A1-AS1 AS3MT CYP17A1
GH10I102830 Enhancer 0.7 dbSUPER 550.8 -1.4 -1403 1.6 ELF3 TFAP4 MXI1 SAP130 ARID4B MAX ZNF48 RAD21 RARA YY1 CYP17A1-AS1 AS3MT BORCS7 CNNM2 WBP1L CYP17A1 RNU6-1231P
GH10I102832 Enhancer 0.3 dbSUPER 550.8 +0.3 255 1.2 IKZF1 CYP17A1-AS1 AS3MT BORCS7 CYP17A1
GH10I102772 Promoter/Enhancer 2.1 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 6.2 -54.0 -53981 11.8 PKNOX1 FOXA2 SIN3A YY1 ZNF121 GLIS2 FOS RUNX3 RXRA REST WBP1L SFXN2 AS3MT ARL3 PPRC1 NFKB2 LDB1 PDCD11 BORCS7 CYP17A1
GH10I102449 Promoter/Enhancer 1.6 Ensembl ENCODE 5.2 -379.5 -379487 8 PKNOX1 FOXA2 ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF766 C10orf95 RPARP-AS1 PPRC1 PCGF6 PDCD11 GBF1 MFSD13A SFXN2 CYP17A1-AS1 CUEDC2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CYP17A1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CYP17A1-AS1 Gene

Genomic Locations for CYP17A1-AS1 Gene
chr10:102,832,667-102,834,516
(GRCh38/hg38)
Size:
1,850 bases
Orientation:
Plus strand
chr10:104,590,493-104,594,273
(GRCh37/hg19)

Genomic View for CYP17A1-AS1 Gene

Genes around CYP17A1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CYP17A1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CYP17A1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CYP17A1-AS1 Gene

Proteins for CYP17A1-AS1 Gene

Post-translational modifications for CYP17A1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CYP17A1-AS1 Gene

Domains & Families for CYP17A1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CYP17A1-AS1 Gene

Function for CYP17A1-AS1 Gene

Phenotypes From GWAS Catalog for CYP17A1-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CYP17A1-AS1 Gene

Localization for CYP17A1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CYP17A1-AS1 Gene

Pathways & Interactions for CYP17A1-AS1 Gene

SuperPathways for CYP17A1-AS1 Gene

No Data Available

Interacting Proteins for CYP17A1-AS1 Gene

Gene Ontology (GO) - Biological Process for CYP17A1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CYP17A1-AS1 Gene

Drugs & Compounds for CYP17A1-AS1 Gene

No Compound Related Data Available

Transcripts for CYP17A1-AS1 Gene

mRNA/cDNA for CYP17A1-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CYP17A1-AS1 Gene

No ASD Table

Relevant External Links for CYP17A1-AS1 Gene

GeneLoc Exon Structure for
CYP17A1-AS1
ECgene alternative splicing isoforms for
CYP17A1-AS1

Expression for CYP17A1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CYP17A1-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for CYP17A1-AS1 Gene

This gene is overexpressed in Adrenal Gland (x23.6).
genes like me logo Genes that share expression patterns with CYP17A1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CYP17A1-AS1 Gene

Orthologs for CYP17A1-AS1 Gene

Evolution for CYP17A1-AS1 Gene

ENSEMBL:
Gene Tree for CYP17A1-AS1 (if available)
TreeFam:
Gene Tree for CYP17A1-AS1 (if available)

No data available for Orthologs for CYP17A1-AS1 Gene

Paralogs for CYP17A1-AS1 Gene

No data available for Paralogs for CYP17A1-AS1 Gene

Variants for CYP17A1-AS1 Gene

Sequence variations from dbSNP and Humsavar for CYP17A1-AS1 Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs104894136 pathogenic, risk-factor, Combined partial 17-alpha-hydroxylase/17,20-lyase deficiency, Breast cancer, susceptibility to, not provided 102,834,074(+) G/A intron_variant
rs104894137 pathogenic, Combined partial 17-alpha-hydroxylase/17,20-lyase deficiency 102,832,626(+) G/T upstream_transcript_variant
rs104894139 pathogenic, Isolated 17,20-lyase deficiency 102,832,577(+) C/T upstream_transcript_variant
rs104894142 pathogenic, Complete combined 17-alpha-hydroxylase/17,20-lyase deficiency 102,832,566(+) G/A upstream_transcript_variant
rs104894143 pathogenic, Complete combined 17-alpha-hydroxylase/17,20-lyase deficiency 102,831,535(+) A/G upstream_transcript_variant

Additional Variant Information for CYP17A1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CYP17A1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CYP17A1-AS1 Gene

Disorders for CYP17A1-AS1 Gene

No disorders were found for CYP17A1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CYP17A1-AS1 Gene

Publications for CYP17A1-AS1 Gene

  1. Genome-wide association study of blood pressure and hypertension. (PMID: 19430479) Levy D … van Duijn CM (Nature genetics 2009) 3 58
  2. Genome-wide association study reveals genetic risk underlying Parkinson's disease. (PMID: 19915575) Simón-Sánchez J … Gasser T (Nature genetics 2009) 3 58
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58

Products for CYP17A1-AS1 Gene

Sources for CYP17A1-AS1 Gene

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