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Aliases for CYCSP8 Gene

Subcategory (RNA class) for CYCSP8 Gene

lncRNA

Aliases for CYCSP8 Gene

  • Cytochrome C, Somatic Pseudogene 8 2 3 5
  • HCP8 3

External Ids for CYCSP8 Gene

ORGUL Members for CYCSP8 Gene

Previous GeneCards Identifiers for CYCSP8 Gene

  • GC02P131368
  • GC02P131250
  • GC02P131536
  • GC02P131551
  • GC02P130812
  • GC02P130814
  • GC02P130826
  • GC02P130857
  • GC02P130880
  • GC02P130885
  • GC02P130910
  • GC02P130929

Summaries for CYCSP8 Gene

GeneCards Summary for CYCSP8 Gene

CYCSP8 (Cytochrome C, Somatic Pseudogene 8) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for CYCSP8 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CYCSP8 Gene

Genomics for CYCSP8 Gene

GeneHancer (GH) Regulatory Elements for CYCSP8 Gene

Promoters and enhancers for CYCSP8 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J130797 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +21.3 21309 1.8 ATF1 ZFP64 ARID4B SIN3A DMAP1 ZBTB7B ZNF48 SLC30A9 ZNF121 GLIS2 CCDC115 CYCSP8 ARHGEF4 GC02P130573
GH02J130807 Enhancer 1 ENCODE dbSUPER 0.3 +31.7 31740 2.5 MXI1 CLOCK NFIB JUN MAX EBF1 CEBPG RAD21 CTBP1 POLR2A ENSG00000229797 AMER3 ARHGEF4 CYCSP8 GC02P130573
GH02J130826 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.2 +51.7 51688 3 PKNOX1 JUN MAX BRCA1 ZFHX2 POLR2A FOS MAFK NFE2L2 CHD2 ARHGEF4 ENSG00000233221 CYCSP8 GC02P130573
GH02J130819 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.3 +43.8 43805 1.1 CTCF REST ZIC2 GPR148 ARHGEF4 CYCSP8 GC02P130573
GH02J130823 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.2 +47.9 47941 1.9 HDGF BMI1 BATF IRF4 ZSCAN5C ZNF207 ZNF143 ATF7 FOS ETV6 GPR148 ARHGEF4 MZT2B CCDC74A CYCSP8 GC02P130573
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CYCSP8 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CYCSP8 Gene

Genomic Locations for CYCSP8 Gene
chr2:130,776,646-130,776,957
(GRCh38/hg38)
Size:
312 bases
Orientation:
Plus strand
chr2:131,534,219-131,534,530
(GRCh37/hg19)
Size:
312 bases
Orientation:
Plus strand

Genomic View for CYCSP8 Gene

Genes around CYCSP8 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CYCSP8 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CYCSP8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CYCSP8 Gene

Function for CYCSP8 Gene

Phenotypes From GWAS Catalog for CYCSP8 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CYCSP8 Gene

Localization for CYCSP8 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CYCSP8 Gene

Pathways & Interactions for CYCSP8 Gene

SuperPathways for CYCSP8 Gene

No Data Available

Interacting Proteins for CYCSP8 Gene

Gene Ontology (GO) - Biological Process for CYCSP8 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CYCSP8 Gene

Drugs & Compounds for CYCSP8 Gene

No Compound Related Data Available

Transcripts for CYCSP8 Gene

mRNA/cDNA for CYCSP8 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CYCSP8 Gene

No ASD Table

Relevant External Links for CYCSP8 Gene

GeneLoc Exon Structure for
CYCSP8
ECgene alternative splicing isoforms for
CYCSP8

Expression for CYCSP8 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CYCSP8 Gene

mRNA differential expression in normal tissues according to GTEx for CYCSP8 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x7.5), Brain - Cerebellum (x7.3), Brain - Frontal Cortex (BA9) (x6.1), Brain - Cortex (x5.5), Brain - Anterior cingulate cortex (BA24) (x5.0), and Brain - Nucleus accumbens (basal ganglia) (x4.5).

NURSA nuclear receptor signaling pathways regulating expression of CYCSP8 Gene:

CYCSP8
genes like me logo Genes that share expression patterns with CYCSP8: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CYCSP8 Gene

Orthologs for CYCSP8 Gene

Evolution for CYCSP8 Gene

ENSEMBL:
Gene Tree for CYCSP8 (if available)
TreeFam:
Gene Tree for CYCSP8 (if available)

No data available for Orthologs for CYCSP8 Gene

Paralogs for CYCSP8 Gene

No data available for Paralogs for CYCSP8 Gene

Variants for CYCSP8 Gene

Additional Variant Information for CYCSP8 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CYCSP8

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CYCSP8 Gene

Disorders for CYCSP8 Gene

No disorders were found for CYCSP8 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CYCSP8 Gene

Publications for CYCSP8 Gene

  1. The human genome has 49 cytochrome c pseudogenes, including a relic of a primordial gene that still functions in mouse. (PMID: 12909341) Zhang Z … Gerstein M (Gene 2003) 2 3 58
  2. Genome-wide association study of a heart failure related metabolomic profile among African Americans in the Atherosclerosis Risk in Communities (ARIC) study. (PMID: 23934736) Yu B … Boerwinkle E (Genetic epidemiology 2013) 3 58

Products for CYCSP8 Gene

Sources for CYCSP8 Gene

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