Aliases for CYCSP8 Gene

Aliases for CYCSP8 Gene

  • CYCS Pseudogene 8 2 3 5
  • Cytochrome C, Somatic Pseudogene 8 2 3
  • HCP8 3

External Ids for CYCSP8 Gene

Previous GeneCards Identifiers for CYCSP8 Gene

  • GC02P131368
  • GC02P131250
  • GC02P131536
  • GC02P131551
  • GC02P130812
  • GC02P130814
  • GC02P131001
  • GC02P131027
  • GC02P130826
  • GC02P130857
  • GC02P130880
  • GC02P130885
  • GC02P130910
  • GC02P130929
  • GC02P130954
  • GC02P130974

Summaries for CYCSP8 Gene

GeneCards Summary for CYCSP8 Gene

CYCSP8 (CYCS Pseudogene 8) is a Pseudogene.

Additional gene information for CYCSP8 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CYCSP8 Gene

Genomics for CYCSP8 Gene

GeneHancer (GH) Regulatory Elements for CYCSP8 Gene

Promoters and enhancers for CYCSP8 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J130341 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 16 -434.2 -434245 4 ZBTB40 SP1 CTCF SIX5 ZBTB6 MLX RBPJ POLR2A USF2 HDAC2 CCDC115 HSALNG0018800 IMP4 lnc-POTEI-3 lnc-PTPN18-2 piR-37496 SMPD4 CYCSP8 PTPN18 ENSG00000229797
GH02J130336 Promoter/Enhancer 1.5 ENCODE CraniofacialAtlas 16 -438.3 -438279 3.4 GTF3C2 SIN3A ZNF24 ZBTB40 MLX SMARCE1 POLR2A USF2 NR2F6 CREB1 AB330769-002 TRE-TTC1-1 SMPD4 CYCSP8 PTPN18 CCDC74B ENSG00000229797 FAM168B ARHGEF4 AMER3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CYCSP8 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CYCSP8 Gene

Genomic Locations for CYCSP8 Gene
chr2:130,776,646-130,776,957
(GRCh38/hg38)
Size:
312 bases
Orientation:
Plus strand
chr2:131,534,219-131,534,530
(GRCh37/hg19)
Size:
312 bases
Orientation:
Plus strand

Genomic View for CYCSP8 Gene

Genes around CYCSP8 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CYCSP8 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CYCSP8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CYCSP8 Gene

Proteins for CYCSP8 Gene

Post-translational modifications for CYCSP8 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CYCSP8 Gene

Domains & Families for CYCSP8 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CYCSP8 Gene

Function for CYCSP8 Gene

Phenotypes From GWAS Catalog for CYCSP8 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CYCSP8 Gene

Localization for CYCSP8 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CYCSP8 Gene

Pathways & Interactions for CYCSP8 Gene

PathCards logo

SuperPathways for CYCSP8 Gene

No Data Available

Gene Ontology (GO) - Biological Process for CYCSP8 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CYCSP8 Gene

Drugs & Compounds for CYCSP8 Gene

No Compound Related Data Available

Transcripts for CYCSP8 Gene

mRNA/cDNA for CYCSP8 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for CYCSP8 Gene

No ASD Table

Relevant External Links for CYCSP8 Gene

GeneLoc Exon Structure for
CYCSP8
ECgene alternative splicing isoforms for
CYCSP8

Expression for CYCSP8 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CYCSP8 Gene

mRNA differential expression in normal tissues according to GTEx for CYCSP8 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x7.5), Brain - Cerebellum (x7.3), Brain - Frontal Cortex (BA9) (x6.1), Brain - Cortex (x5.5), Brain - Anterior cingulate cortex (BA24) (x5.0), and Brain - Nucleus accumbens (basal ganglia) (x4.5).

NURSA nuclear receptor signaling pathways regulating expression of CYCSP8 Gene:

CYCSP8
genes like me logo Genes that share expression patterns with CYCSP8: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CYCSP8 Gene

Orthologs for CYCSP8 Gene

Evolution for CYCSP8 Gene

ENSEMBL:
Gene Tree for CYCSP8 (if available)
TreeFam:
Gene Tree for CYCSP8 (if available)

No data available for Orthologs for CYCSP8 Gene

Paralogs for CYCSP8 Gene

No data available for Paralogs for CYCSP8 Gene

Variants for CYCSP8 Gene

Additional Variant Information for CYCSP8 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CYCSP8

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CYCSP8 Gene

Disorders for CYCSP8 Gene

No disorders were found for CYCSP8 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CYCSP8 Gene

Publications for CYCSP8 Gene

  1. The human genome has 49 cytochrome c pseudogenes, including a relic of a primordial gene that still functions in mouse. (PMID: 12909341) Zhang Z … Gerstein M (Gene 2003) 2 3 56
  2. Genome-wide association study of a heart failure related metabolomic profile among African Americans in the Atherosclerosis Risk in Communities (ARIC) study. (PMID: 23934736) Yu B … Boerwinkle E (Genetic epidemiology 2013) 3 56

Products for CYCSP8 Gene

Sources for CYCSP8 Gene