Aliases for CYCSP7 Gene

Aliases for CYCSP7 Gene

  • CYCS Pseudogene 7 2 3 5
  • Cytochrome C, Somatic Pseudogene 7 2 3
  • HCP7 2 3
  • CYCSP7 5

External Ids for CYCSP7 Gene

Previous GeneCards Identifiers for CYCSP7 Gene

  • GC02M100446
  • GC02M100987

Summaries for CYCSP7 Gene

GeneCards Summary for CYCSP7 Gene

CYCSP7 (CYCS Pseudogene 7) is a Pseudogene.

Additional gene information for CYCSP7 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CYCSP7 Gene

Genomics for CYCSP7 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for CYCSP7 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J100368 Enhancer 0.2 Ensembl 250.7 +1.6 1604 0.4 CYCSP7 LONRF2 HSALNG0017296 CHST10
GH02J100367 Enhancer 0.2 Ensembl 0.7 +2.8 2804 1.2 CYCSP7 HSALNG0017296 CHST10 LONRF2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CYCSP7 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for CYCSP7 Gene

Latest Assembly
chr2:100,369,631-100,370,605
(GRCh38/hg38)
Size:
975 bases
Orientation:
Minus strand

Previous Assembly
chr2:100,986,093-100,987,067
(GRCh37/hg19 by Entrez Gene)
Size:
975 bases
Orientation:
Minus strand

chr2:100,986,705-100,987,007
(GRCh37/hg19 by Ensembl)
Size:
303 bases
Orientation:
Minus strand

Genomic View for CYCSP7 Gene

Genes around CYCSP7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CYCSP7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CYCSP7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CYCSP7 Gene

Proteins for CYCSP7 Gene

Post-translational modifications for CYCSP7 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CYCSP7 Gene

Domains & Families for CYCSP7 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CYCSP7 Gene

Function for CYCSP7 Gene

Phenotypes From GWAS Catalog for CYCSP7 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CYCSP7 Gene

Localization for CYCSP7 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CYCSP7 Gene

Pathways & Interactions for CYCSP7 Gene

PathCards logo

SuperPathways for CYCSP7 Gene

No Data Available

Gene Ontology (GO) - Biological Process for CYCSP7 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CYCSP7 Gene

Drugs & Compounds for CYCSP7 Gene

(1) Drugs for CYCSP7 Gene - From: ApexBio

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Cytochrome c - pigeon (88-104) Pharma Triggers T Cell response 0

(1) ApexBio Compounds for CYCSP7 Gene

Compound Action Cas Number
Cytochrome c - pigeon (88-104) Triggers T Cell response 86579-06-8
genes like me logo Genes that share compounds with CYCSP7: view

Drug products for research

Transcripts for CYCSP7 Gene

mRNA/cDNA for CYCSP7 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CYCSP7 Gene

No ASD Table

Relevant External Links for CYCSP7 Gene

GeneLoc Exon Structure for
CYCSP7

Expression for CYCSP7 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CYCSP7 Gene

genes like me logo Genes that share expression patterns with CYCSP7: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CYCSP7 Gene

Orthologs for CYCSP7 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for CYCSP7 Gene

Organism Taxonomy Gene Similarity Type Details
Mouse
(Mus musculus)
Mammalia Cycs 31
  • 76 (a)
OneToMany
Gm10053 31
  • 76 (a)
OneToMany
Cow
(Bos Taurus)
Mammalia CYCS 31
  • 75 (a)
ManyToMany
Dog
(Canis familiaris)
Mammalia CYCS 31
  • 74 (a)
OneToMany
Oppossum
(Monodelphis domestica)
Mammalia -- 31
  • 72 (a)
OneToMany
Platypus
(Ornithorhynchus anatinus)
Mammalia -- 31
  • 71 (a)
OneToMany
Chicken
(Gallus gallus)
Aves CYC 31
  • 71 (a)
OneToMany
Lizard
(Anolis carolinensis)
Reptilia -- 31
  • 68 (a)
OneToMany
Zebrafish
(Danio rerio)
Actinopterygii cycsa 31
  • 41 (a)
OneToMany
Fruit Fly
(Drosophila melanogaster)
Insecta Cyt-c-p 31
  • 60 (a)
OneToMany
Worm
(Caenorhabditis elegans)
Secernentea cyc-2.2 31
  • 38 (a)
ManyToMany
Baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes CYC1 31
  • 43 (a)
ManyToMany
CYC7 31
  • 41 (a)
ManyToMany
Sea Squirt
(Ciona savignyi)
Ascidiacea CSA.4826 31
  • 51 (a)
ManyToMany
-- 31
  • 49 (a)
ManyToMany
Species where no ortholog for CYCSP7 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)

Evolution for CYCSP7 Gene

ENSEMBL:
Gene Tree for CYCSP7 (if available)
TreeFam:
Gene Tree for CYCSP7 (if available)

Paralogs for CYCSP7 Gene

No data available for Paralogs for CYCSP7 Gene

Variants for CYCSP7 Gene

Additional Variant Information for CYCSP7 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CYCSP7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CYCSP7 Gene

Disorders for CYCSP7 Gene

No disorders were found for CYCSP7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CYCSP7 Gene

Publications for CYCSP7 Gene

  1. The human genome has 49 cytochrome c pseudogenes, including a relic of a primordial gene that still functions in mouse. (PMID: 12909341) Zhang Z … Gerstein M (Gene 2003) 2 3

Products for CYCSP7 Gene

Sources for CYCSP7 Gene