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Aliases for CYCSP6 Gene

Aliases for CYCSP6 Gene

  • Cytochrome C, Somatic Pseudogene 6 2 3 5
  • HCP6 3

External Ids for CYCSP6 Gene

Previous GeneCards Identifiers for CYCSP6 Gene

  • GC02M078552

Summaries for CYCSP6 Gene

GeneCards Summary for CYCSP6 Gene

CYCSP6 (Cytochrome C, Somatic Pseudogene 6) is a Pseudogene.

Additional gene information for CYCSP6 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CYCSP6 Gene

Genomics for CYCSP6 Gene

GeneHancer (GH) Regulatory Elements for CYCSP6 Gene

Promoters and enhancers for CYCSP6 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I078541 Enhancer 0.9 ENCODE 11.3 -128.8 -128757 1.3 SMAD1 FOXA2 ZFP64 ARID4B DMAP1 ZNF48 YY1 SLC30A9 POLR2B SP5 LOC105374820 LOC105374818 CYCSP6 LOC100421651
GH02I078405 Enhancer 0.2 FANTOM5 0.4 +7.3 7346 0.1 CYCSP6 LOC101927967
GH02I078298 Enhancer 0.2 FANTOM5 0.1 +114.7 114659 0.1 LOC101927967 CYCSP6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CYCSP6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CYCSP6 Gene

Genomic Locations for CYCSP6 Gene
chr2:78,412,784-78,413,094
(GRCh38/hg38)
Size:
311 bases
Orientation:
Minus strand
chr2:78,639,910-78,640,220
(GRCh37/hg19)

Genomic View for CYCSP6 Gene

Genes around CYCSP6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CYCSP6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CYCSP6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CYCSP6 Gene

Proteins for CYCSP6 Gene

Post-translational modifications for CYCSP6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CYCSP6 Gene

Domains & Families for CYCSP6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CYCSP6 Gene

Function for CYCSP6 Gene

Phenotypes From GWAS Catalog for CYCSP6 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CYCSP6 Gene

Localization for CYCSP6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CYCSP6 Gene

Pathways & Interactions for CYCSP6 Gene

SuperPathways for CYCSP6 Gene

No Data Available

Interacting Proteins for CYCSP6 Gene

Gene Ontology (GO) - Biological Process for CYCSP6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CYCSP6 Gene

Drugs & Compounds for CYCSP6 Gene

No Compound Related Data Available

Transcripts for CYCSP6 Gene

mRNA/cDNA for CYCSP6 Gene

(8) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CYCSP6 Gene

No ASD Table

Relevant External Links for CYCSP6 Gene

GeneLoc Exon Structure for
CYCSP6
ECgene alternative splicing isoforms for
CYCSP6

Expression for CYCSP6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CYCSP6 Gene

mRNA differential expression in normal tissues according to GTEx for CYCSP6 Gene

This gene is overexpressed in Testis (x15.2), Brain - Frontal Cortex (BA9) (x8.2), and Brain - Anterior cingulate cortex (BA24) (x4.2).

NURSA nuclear receptor signaling pathways regulating expression of CYCSP6 Gene:

CYCSP6
genes like me logo Genes that share expression patterns with CYCSP6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CYCSP6 Gene

Orthologs for CYCSP6 Gene

Evolution for CYCSP6 Gene

ENSEMBL:
Gene Tree for CYCSP6 (if available)
TreeFam:
Gene Tree for CYCSP6 (if available)

No data available for Orthologs for CYCSP6 Gene

Paralogs for CYCSP6 Gene

No data available for Paralogs for CYCSP6 Gene

Variants for CYCSP6 Gene

Additional Variant Information for CYCSP6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CYCSP6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CYCSP6 Gene

Disorders for CYCSP6 Gene

Additional Disease Information for CYCSP6

Genetic Association Database
(GAD)

No disorders were found for CYCSP6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CYCSP6 Gene

Publications for CYCSP6 Gene

  1. The human genome has 49 cytochrome c pseudogenes, including a relic of a primordial gene that still functions in mouse. (PMID: 12909341) Zhang Z … Gerstein M (Gene 2003) 2 3 58
  2. Conduct disorder and ADHD: evaluation of conduct problems as a categorical and quantitative trait in the international multicentre ADHD genetics study. (PMID: 18951430) Anney RJ … Gill M (American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics 2008) 3 58
  3. A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study. (PMID: 17903292) Hwang SJ … Fox CS (BMC medical genetics 2007) 44 58
  4. Genetic correlates of longevity and selected age-related phenotypes: a genome-wide association study in the Framingham Study. (PMID: 17903295) Lunetta KL … Murabito JM (BMC medical genetics 2007) 44 58
  5. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel DP … Karasik D (BMC medical genetics 2007) 44 58

Products for CYCSP6 Gene

Sources for CYCSP6 Gene

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