Aliases for CYCSP53 Gene

Aliases for CYCSP53 Gene

  • CYCS Pseudogene 53 2 3 5
  • Cytochrome C, Somatic Pseudogene 53 2 3
  • HCP3 3

External Ids for CYCSP53 Gene

Previous GeneCards Identifiers for CYCSP53 Gene

  • GC01M168146
  • GC01M169680
  • GC01M171414

Summaries for CYCSP53 Gene

GeneCards Summary for CYCSP53 Gene

CYCSP53 (CYCS Pseudogene 53) is a Pseudogene.

Additional gene information for CYCSP53 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CYCSP53 Gene

Genomics for CYCSP53 Gene

GeneHancer (GH) Regulatory Elements for CYCSP53 Gene

Promoters and enhancers for CYCSP53 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J171446 Enhancer 0.2 Ensembl 750.6 -1.2 -1238 0.4 CYCSP53 lnc-MYOC-3 PRRC2C RF01210-027
GH01J171467 Enhancer 0.7 Ensembl ENCODE 0.3 -23.3 -23338 1.8 IKZF1 BACH1 IKZF2 DPF2 BCL11A BMI1 JUNB BATF IRF4 ZNF217 MYOC RF01210-027 CYCSP53 lnc-MYOC-3
GH01J171477 Enhancer 0.6 Ensembl 0.3 -32.7 -32738 1.4 CEBPG ZNF316 MAFG FOXA2 GABPA DPF2 CEBPB TFAP4 FOXA1 NFE2 RF01210-027 CYCSP53 lnc-MYOC-3
GH01J171479 Enhancer 0.6 Ensembl 0.3 -34.9 -34937 1 ZNF133 MAFK PRDM1 ZNF316 MAFG WT1 CEBPB NFE2 ATF2 ZNF398 PRRC2C VAMP4 RF01210-027 CYCSP53 lnc-MYOC-3
GH01J171460 Enhancer 0.2 Ensembl 0.4 -15.5 -15538 0.6 PRRC2C CYCSP53 lnc-MYOC-3 RF01210-027
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CYCSP53 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CYCSP53 Gene

Genomic Locations for CYCSP53 Gene
chr1:171,444,684-171,444,963
(GRCh38/hg38)
Size:
280 bases
Orientation:
Minus strand
chr1:171,413,823-171,414,102
(GRCh37/hg19)
Size:
280 bases
Orientation:
Minus strand

Genomic View for CYCSP53 Gene

Genes around CYCSP53 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CYCSP53 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CYCSP53 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CYCSP53 Gene

Proteins for CYCSP53 Gene

Post-translational modifications for CYCSP53 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CYCSP53 Gene

Domains & Families for CYCSP53 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CYCSP53 Gene

Function for CYCSP53 Gene

Phenotypes From GWAS Catalog for CYCSP53 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CYCSP53 Gene

Localization for CYCSP53 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CYCSP53 Gene

Pathways & Interactions for CYCSP53 Gene

PathCards logo

SuperPathways for CYCSP53 Gene

No Data Available

Gene Ontology (GO) - Biological Process for CYCSP53 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CYCSP53 Gene

Drugs & Compounds for CYCSP53 Gene

No Compound Related Data Available

Transcripts for CYCSP53 Gene

mRNA/cDNA for CYCSP53 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for CYCSP53 Gene

No ASD Table

Relevant External Links for CYCSP53 Gene

GeneLoc Exon Structure for
CYCSP53
ECgene alternative splicing isoforms for
CYCSP53

Expression for CYCSP53 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CYCSP53 Gene

NURSA nuclear receptor signaling pathways regulating expression of CYCSP53 Gene:

CYCSP53
genes like me logo Genes that share expression patterns with CYCSP53: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CYCSP53 Gene

Orthologs for CYCSP53 Gene

Evolution for CYCSP53 Gene

ENSEMBL:
Gene Tree for CYCSP53 (if available)
TreeFam:
Gene Tree for CYCSP53 (if available)

No data available for Orthologs for CYCSP53 Gene

Paralogs for CYCSP53 Gene

No data available for Paralogs for CYCSP53 Gene

Variants for CYCSP53 Gene

Additional Variant Information for CYCSP53 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CYCSP53

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CYCSP53 Gene

Disorders for CYCSP53 Gene

No disorders were found for CYCSP53 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CYCSP53 Gene

Publications for CYCSP53 Gene

  1. The human genome has 49 cytochrome c pseudogenes, including a relic of a primordial gene that still functions in mouse. (PMID: 12909341) Zhang Z … Gerstein M (Gene 2003) 2 3 56

Products for CYCSP53 Gene

Sources for CYCSP53 Gene