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Aliases for CYCSP51 Gene

Subcategory (RNA class) for CYCSP51 Gene

lncRNA

Aliases for CYCSP51 Gene

  • Cytochrome C, Somatic Pseudogene 51 2 3 5
  • HCP1 3

External Ids for CYCSP51 Gene

ORGUL Members for CYCSP51 Gene

Previous GeneCards Identifiers for CYCSP51 Gene

  • GC01P147691
  • GC01P149142
  • GC01P150877

Summaries for CYCSP51 Gene

GeneCards Summary for CYCSP51 Gene

CYCSP51 (Cytochrome C, Somatic Pseudogene 51) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for CYCSP51 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CYCSP51 Gene

Genomics for CYCSP51 Gene

GeneHancer (GH) Regulatory Elements for CYCSP51 Gene

Promoters and enhancers for CYCSP51 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J150557 Promoter/Enhancer 2.6 EPDnew Ensembl ENCODE dbSUPER 14.6 -334.6 -334592 23.1 CLOCK MLX DMAP1 IRF4 YY1 SLC30A9 E2F8 ZNF143 SP3 NFYC RN7SL600P MCL1 SETDB1 PIP5K1A PI4KB PRPF3 ARNT GOLPH3L HORMAD1 SF3B4
GH01J150320 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE 14.6 -582.1 -582140 2.4 HDGF PKNOX1 CLOCK SMAD1 MLX ARNT ARID4B NEUROD1 SIN3A DMAP1 PRPF3 GABPB2 SETDB1 PIP5K1A ARNT UBE2D3P3 RPRD2 GOLPH3L SF3B4 ZNF687
GH01J150232 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 14.6 -668.8 -668760 4.8 CLOCK MLX DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 GC01P150237 RNU2-17P ANP32E SETDB1 PRPF3 PIP5K1A GABPB2 SF3B4 ARNT UBE2D3P3
GH01J150874 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 14.9 -28.0 -27996 3.7 CLOCK FEZF1 DMAP1 YY1 ZNF213 ZNF143 SP3 NFYC MEF2D ZNF610 ARNT MRPL9 HORMAD1 RPRD2 PI4KB PIP5K1A POGZ LYSMD1 SETDB1 GOLPH3L
GH01J150514 Promoter/Enhancer 1.5 Ensembl ENCODE 14.6 -388.1 -388082 2.7 HDGF PKNOX1 FOXA2 ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZBTB7B SLC30A9 GC01P150516 FALEC ADAMTSL4 MRPS21 PIP5K1A SETDB1 CYCSP51 C1orf56 LOC100289061 ADAMTSL4-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CYCSP51 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CYCSP51 Gene

Genomic Locations for CYCSP51 Gene
chr1:150,903,896-150,904,213
(GRCh38/hg38)
Size:
318 bases
Orientation:
Plus strand
chr1:150,876,372-150,876,689
(GRCh37/hg19)
Size:
318 bases
Orientation:
Plus strand

Genomic View for CYCSP51 Gene

Genes around CYCSP51 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CYCSP51 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CYCSP51 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CYCSP51 Gene

Function for CYCSP51 Gene

Phenotypes From GWAS Catalog for CYCSP51 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CYCSP51 Gene

Localization for CYCSP51 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CYCSP51 Gene

Pathways & Interactions for CYCSP51 Gene

SuperPathways for CYCSP51 Gene

No Data Available

Interacting Proteins for CYCSP51 Gene

Gene Ontology (GO) - Biological Process for CYCSP51 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CYCSP51 Gene

Drugs & Compounds for CYCSP51 Gene

No Compound Related Data Available

Transcripts for CYCSP51 Gene

mRNA/cDNA for CYCSP51 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CYCSP51 Gene

No ASD Table

Relevant External Links for CYCSP51 Gene

GeneLoc Exon Structure for
CYCSP51
ECgene alternative splicing isoforms for
CYCSP51

Expression for CYCSP51 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CYCSP51 Gene

NURSA nuclear receptor signaling pathways regulating expression of CYCSP51 Gene:

CYCSP51
genes like me logo Genes that share expression patterns with CYCSP51: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CYCSP51 Gene

Orthologs for CYCSP51 Gene

Evolution for CYCSP51 Gene

ENSEMBL:
Gene Tree for CYCSP51 (if available)
TreeFam:
Gene Tree for CYCSP51 (if available)

No data available for Orthologs for CYCSP51 Gene

Paralogs for CYCSP51 Gene

No data available for Paralogs for CYCSP51 Gene

Variants for CYCSP51 Gene

Additional Variant Information for CYCSP51 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CYCSP51

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CYCSP51 Gene

Disorders for CYCSP51 Gene

No disorders were found for CYCSP51 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CYCSP51 Gene

Publications for CYCSP51 Gene

  1. The human genome has 49 cytochrome c pseudogenes, including a relic of a primordial gene that still functions in mouse. (PMID: 12909341) Zhang Z … Gerstein M (Gene 2003) 2 3 58

Products for CYCSP51 Gene

Sources for CYCSP51 Gene

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