Aliases for CYCSP5 Gene

Aliases for CYCSP5 Gene

  • CYCS Pseudogene 5 2 3 5
  • Cytochrome C, Somatic Pseudogene 5 2 3
  • HCP5 3

External Ids for CYCSP5 Gene

Previous GeneCards Identifiers for CYCSP5 Gene

  • GC01M241089
  • GC01M242828
  • GC01M244763

Summaries for CYCSP5 Gene

GeneCards Summary for CYCSP5 Gene

CYCSP5 (CYCS Pseudogene 5) is a Pseudogene.

Additional gene information for CYCSP5 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CYCSP5 Gene

Genomics for CYCSP5 Gene

GeneHancer (GH) Regulatory Elements for CYCSP5 Gene

Promoters and enhancers for CYCSP5 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J244599 Enhancer 1.1 FANTOM5 ENCODE 500.7 -1.3 -1274 1.7 GTF2E2 JUND FOS ZNF639 ZNF10 EP300 POLR2A ZNF510 JUN TRIM22 CYCSP5 lnc-ADSS-6 HNRNPU DESI2 ADSS2 EFCAB2 lnc-ADSS-8 CATSPERE
GH01J244598 Enhancer 0.2 FANTOM5 500.7 -0.1 -146 0.2 CYCSP5 lnc-ADSS-6 lnc-ADSS-8 CATSPERE
GH01J244613 Enhancer 0.5 Ensembl ENCODE 0.4 -16.0 -16007 1.8 BHLHE40 HLF DESI2 lnc-ADSS-6 CYCSP5 lnc-ADSS-8 CATSPERE
GH01J244634 Enhancer 0.3 Ensembl 0.3 -36.2 -36214 0.2 RBM25 GATA3 lnc-ADSS-8 CYCSP5 lnc-ADSS-6 CATSPERE
GH01J244608 Enhancer 0.2 Ensembl 0.4 -10.1 -10113 0.4 lnc-ADSS-6 CYCSP5 lnc-ADSS-8 CATSPERE
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CYCSP5 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CYCSP5 Gene

Genomic Locations for CYCSP5 Gene
chr1:244,598,390-244,598,687
(GRCh38/hg38)
Size:
298 bases
Orientation:
Minus strand
chr1:244,761,692-244,761,989
(GRCh37/hg19)
Size:
298 bases
Orientation:
Minus strand

Genomic View for CYCSP5 Gene

Genes around CYCSP5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CYCSP5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CYCSP5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CYCSP5 Gene

Proteins for CYCSP5 Gene

Post-translational modifications for CYCSP5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CYCSP5 Gene

Domains & Families for CYCSP5 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CYCSP5 Gene

Function for CYCSP5 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CYCSP5 Gene

Localization for CYCSP5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CYCSP5 Gene

Pathways & Interactions for CYCSP5 Gene

PathCards logo

SuperPathways for CYCSP5 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for CYCSP5 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CYCSP5 Gene

Drugs & Compounds for CYCSP5 Gene

(2) Drugs for CYCSP5 Gene - From: PharmGKB

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Allopurinol Approved Pharma 198
Nevirapine Approved Pharma 230
genes like me logo Genes that share compounds with CYCSP5: view

Transcripts for CYCSP5 Gene

mRNA/cDNA for CYCSP5 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CYCSP5 Gene

No ASD Table

Relevant External Links for CYCSP5 Gene

GeneLoc Exon Structure for
CYCSP5

Expression for CYCSP5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CYCSP5 Gene

genes like me logo Genes that share expression patterns with CYCSP5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CYCSP5 Gene

Orthologs for CYCSP5 Gene

Evolution for CYCSP5 Gene

ENSEMBL:
Gene Tree for CYCSP5 (if available)
TreeFam:
Gene Tree for CYCSP5 (if available)

No data available for Orthologs for CYCSP5 Gene

Paralogs for CYCSP5 Gene

No data available for Paralogs for CYCSP5 Gene

Variants for CYCSP5 Gene

Additional Variant Information for CYCSP5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CYCSP5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CYCSP5 Gene

Disorders for CYCSP5 Gene

No disorders were found for CYCSP5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CYCSP5 Gene

Publications for CYCSP5 Gene

  1. The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes. (PMID: 12815422) Skaletsky H … Page DC (Nature 2003) 2 3 54
  2. The human genome has 49 cytochrome c pseudogenes, including a relic of a primordial gene that still functions in mouse. (PMID: 12909341) Zhang Z … Gerstein M (Gene 2003) 2 3 54

Products for CYCSP5 Gene

Sources for CYCSP5 Gene