Aliases for CYCSP29 Gene

Aliases for CYCSP29 Gene

  • CYCS Pseudogene 29 2 3 5
  • Cytochrome C, Somatic Pseudogene 29 2 3
  • HCP29 3

External Ids for CYCSP29 Gene

Previous GeneCards Identifiers for CYCSP29 Gene

  • GC11M108199
  • GC11M108693

Summaries for CYCSP29 Gene

GeneCards Summary for CYCSP29 Gene

CYCSP29 (CYCS Pseudogene 29) is a Pseudogene.

Additional gene information for CYCSP29 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CYCSP29 Gene

Genomics for CYCSP29 Gene

GeneHancer (GH) Regulatory Elements for CYCSP29 Gene

Promoters and enhancers for CYCSP29 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J108824 Enhancer 0.3 Ensembl 500.7 -2.0 -1951 1.2 CTCF CYCSP29 lnc-EXPH5-5 ENSG00000203334 DDX10
GH11J108869 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -49.2 -49151 6.4 EP300 CTCF JUND FOS RAD21 ZNF341 OSR2 WT1 ZNF316 SMC3 DDX10 lnc-EXPH5-5 CYCSP29 ENSG00000203334
GH11J108857 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.3 -35.0 -34951 1.6 TRIM28 ATF2 OSR2 NR2F2 ZBTB17 ZNF843 FEZF1 JUN ZNF449 MZF1 DDX10 CYCSP29 lnc-EXPH5-5 ENSG00000203334
GH11J108853 Enhancer 0.8 ENCODE dbSUPER 0.3 -31.7 -31700 1.6 EP300 MEF2C SRF MEF2B ELF1 MAFG ATF2 JUNB HLF ATF7 DDX10 CYCSP29 lnc-EXPH5-5 ENSG00000203334
GH11J108886 Enhancer 1 Ensembl ENCODE dbSUPER 0.2 -63.8 -63751 3.6 EP300 ZNF10 ATF2 OSR2 WT1 ZBTB17 FOSL2 FOS ZNF335 ZNF843 DDX10 CYCSP29 lnc-EXPH5-5 ENSG00000203334
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CYCSP29 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CYCSP29 Gene

Genomic Locations for CYCSP29 Gene
chr11:108,822,333-108,822,650
(GRCh38/hg38)
Size:
318 bases
Orientation:
Minus strand
chr11:108,693,060-108,693,377
(GRCh37/hg19)
Size:
318 bases
Orientation:
Minus strand

Genomic View for CYCSP29 Gene

Genes around CYCSP29 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CYCSP29 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CYCSP29 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CYCSP29 Gene

Proteins for CYCSP29 Gene

Post-translational modifications for CYCSP29 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CYCSP29 Gene

Domains & Families for CYCSP29 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CYCSP29 Gene

Function for CYCSP29 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CYCSP29 Gene

Localization for CYCSP29 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CYCSP29 Gene

Pathways & Interactions for CYCSP29 Gene

PathCards logo

SuperPathways for CYCSP29 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for CYCSP29 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CYCSP29 Gene

Drugs & Compounds for CYCSP29 Gene

No Compound Related Data Available

Transcripts for CYCSP29 Gene

mRNA/cDNA for CYCSP29 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CYCSP29 Gene

No ASD Table

Relevant External Links for CYCSP29 Gene

GeneLoc Exon Structure for
CYCSP29

Expression for CYCSP29 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CYCSP29 Gene

genes like me logo Genes that share expression patterns with CYCSP29: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CYCSP29 Gene

Orthologs for CYCSP29 Gene

Evolution for CYCSP29 Gene

ENSEMBL:
Gene Tree for CYCSP29 (if available)
TreeFam:
Gene Tree for CYCSP29 (if available)

No data available for Orthologs for CYCSP29 Gene

Paralogs for CYCSP29 Gene

No data available for Paralogs for CYCSP29 Gene

Variants for CYCSP29 Gene

Additional Variant Information for CYCSP29 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CYCSP29

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CYCSP29 Gene

Disorders for CYCSP29 Gene

No disorders were found for CYCSP29 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CYCSP29 Gene

Publications for CYCSP29 Gene

  1. The human genome has 49 cytochrome c pseudogenes, including a relic of a primordial gene that still functions in mouse. (PMID: 12909341) Zhang Z … Gerstein M (Gene 2003) 2 3 54

Products for CYCSP29 Gene

Sources for CYCSP29 Gene