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Aliases for CYCSP17 Gene

Subcategory (RNA class) for CYCSP17 Gene

lncRNA

Aliases for CYCSP17 Gene

  • Cytochrome C, Somatic Pseudogene 17 2 3 5
  • HCP17 3

External Ids for CYCSP17 Gene

ORGUL Members for CYCSP17 Gene

Previous GeneCards Identifiers for CYCSP17 Gene

  • GC06P096059
  • GC06P095953

Summaries for CYCSP17 Gene

GeneCards Summary for CYCSP17 Gene

CYCSP17 (Cytochrome C, Somatic Pseudogene 17) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for CYCSP17 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CYCSP17 Gene

Genomics for CYCSP17 Gene

GeneHancer (GH) Regulatory Elements for CYCSP17 Gene

Promoters and enhancers for CYCSP17 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J095545 Enhancer 0.6 ENCODE 0.3 +41.2 41242 0.1 RXRA REST RAD21 YY1 NR2F2 SP1 JUND ATF3 POLR2A ZBTB33 MANEA GC06P095555 CYCSP17
GH06J095516 Enhancer 0.3 ENCODE 0.4 +12.0 12038 0.2 NANOG CYCSP17 GC06P095555
GH06J095482 Enhancer 0.2 FANTOM5 0.3 -21.9 -21882 0.2 CYCSP17 GC06P094939
GH06J095536 Enhancer 0.2 FANTOM5 0.3 +32.7 32686 0.1 MANEA GC06P095555 CYCSP17
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CYCSP17 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CYCSP17 Gene

Genomic Locations for CYCSP17 Gene
chr6:95,504,182-95,504,496
(GRCh38/hg38)
Size:
315 bases
Orientation:
Plus strand
chr6:95,952,058-95,952,372
(GRCh37/hg19)
Size:
315 bases
Orientation:
Plus strand

Genomic View for CYCSP17 Gene

Genes around CYCSP17 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CYCSP17 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CYCSP17 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CYCSP17 Gene

Function for CYCSP17 Gene

Phenotypes From GWAS Catalog for CYCSP17 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CYCSP17 Gene

Localization for CYCSP17 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CYCSP17 Gene

Pathways & Interactions for CYCSP17 Gene

SuperPathways for CYCSP17 Gene

No Data Available

Interacting Proteins for CYCSP17 Gene

Gene Ontology (GO) - Biological Process for CYCSP17 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CYCSP17 Gene

Drugs & Compounds for CYCSP17 Gene

No Compound Related Data Available

Transcripts for CYCSP17 Gene

mRNA/cDNA for CYCSP17 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CYCSP17 Gene

No ASD Table

Relevant External Links for CYCSP17 Gene

GeneLoc Exon Structure for
CYCSP17
ECgene alternative splicing isoforms for
CYCSP17

Expression for CYCSP17 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CYCSP17 Gene

NURSA nuclear receptor signaling pathways regulating expression of CYCSP17 Gene:

CYCSP17
genes like me logo Genes that share expression patterns with CYCSP17: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CYCSP17 Gene

Orthologs for CYCSP17 Gene

Evolution for CYCSP17 Gene

ENSEMBL:
Gene Tree for CYCSP17 (if available)
TreeFam:
Gene Tree for CYCSP17 (if available)

No data available for Orthologs for CYCSP17 Gene

Paralogs for CYCSP17 Gene

No data available for Paralogs for CYCSP17 Gene

Variants for CYCSP17 Gene

Additional Variant Information for CYCSP17 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CYCSP17

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CYCSP17 Gene

Disorders for CYCSP17 Gene

No disorders were found for CYCSP17 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CYCSP17 Gene

Publications for CYCSP17 Gene

  1. The human genome has 49 cytochrome c pseudogenes, including a relic of a primordial gene that still functions in mouse. (PMID: 12909341) Zhang Z … Gerstein M (Gene 2003) 2 3 58

Products for CYCSP17 Gene

Sources for CYCSP17 Gene

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