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Aliases for CXXC1P1 Gene

Aliases for CXXC1P1 Gene

  • CXXC Finger Protein 1 Pseudogene 1 2 3 5
  • CXXC Finger 1 (PHD Domain) Pseudogene 3
  • Chromosome X Open Reading Frame 25 2
  • Non-Protein Coding RNA 236 2
  • CXXC Finger 1 Pseudogene 1 2
  • NCRNA00236 3
  • CXorf25 3

External Ids for CXXC1P1 Gene

Previous HGNC Symbols for CXXC1P1 Gene

  • CXorf25
  • NCRNA00236

Previous GeneCards Identifiers for CXXC1P1 Gene

  • GC0XP047561
  • GC0XP045278

Summaries for CXXC1P1 Gene

GeneCards Summary for CXXC1P1 Gene

CXXC1P1 (CXXC Finger Protein 1 Pseudogene 1) is a Pseudogene.

Additional gene information for CXXC1P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CXXC1P1 Gene

Genomics for CXXC1P1 Gene

GeneHancer (GH) Regulatory Elements for CXXC1P1 Gene

Promoters and enhancers for CXXC1P1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ047706 Enhancer 0.8 Ensembl ENCODE 600.7 +0.4 391 2.7 CBFA2T2 ZNF316 FOSL1 POLR2A NCOR1 TCF12 TAL1 KLF16 TEAD4 EMSY CXXC1P1 UXT-AS1 ENSG00000224656
GH0XJ047712 Enhancer 0.9 Ensembl 0.4 +5.4 5410 0.4 CC2D1A ZKSCAN8 CBFA2T2 MLLT1 GTF2F1 TRIM24 ZNF639 EGR1 SMARCA4 MTA1 CXXC1P1 ENSG00000224656
GH0XJ047683 Enhancer 0.9 Ensembl 0.3 -23.5 -23546 1.2 CC2D1A CBFA2T2 ZNF148 GTF2F1 TRIM24 EGR1 SMARCA4 MTA1 GMEB1 DPF2 UXT UXT-AS1 CXXC1P1
GH0XJ047677 Enhancer 0.9 Ensembl 0.3 -30.6 -30591 0.8 CC2D1A CBFA2T2 MLLT1 TRIM24 EGR1 SMARCA4 MTA1 DPF2 IKZF1 RFX1 ELK1 UXT CXXC1P1
GH0XJ047676 Enhancer 0.8 ENCODE 0.3 -31.1 -31074 0.1 CBFA2T2 MLLT1 TRIM24 EGR1 SMARCA4 MTA1 DPF2 IKZF1 RFX1 PHF21A ELK1 UXT CXXC1P1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CXXC1P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CXXC1P1 Gene

Genomic Locations for CXXC1P1 Gene
46,266 bases
Plus strand
46,266 bases
Plus strand

Genomic View for CXXC1P1 Gene

Genes around CXXC1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CXXC1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CXXC1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CXXC1P1 Gene

Proteins for CXXC1P1 Gene

Post-translational modifications for CXXC1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CXXC1P1 Gene

Domains & Families for CXXC1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CXXC1P1 Gene

Function for CXXC1P1 Gene

genes like me logo Genes that share phenotypes with CXXC1P1: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CXXC1P1 Gene

Localization for CXXC1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CXXC1P1 Gene

Pathways & Interactions for CXXC1P1 Gene

PathCards logo

SuperPathways for CXXC1P1 Gene

No Data Available

Interacting Proteins for CXXC1P1 Gene

Gene Ontology (GO) - Biological Process for CXXC1P1 Gene


No data available for Pathways by source and SIGNOR curated interactions for CXXC1P1 Gene

Drugs & Compounds for CXXC1P1 Gene

No Compound Related Data Available

Transcripts for CXXC1P1 Gene

mRNA/cDNA for CXXC1P1 Gene

(1) Additional mRNA sequences :
(5) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Unigene Clusters for CXXC1P1 Gene

CXXC finger protein 1 pseudogene 1:
Representative Sequences:

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for CXXC1P1 Gene

No ASD Table

Relevant External Links for CXXC1P1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for CXXC1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CXXC1P1 Gene

mRNA differential expression in normal tissues according to GTEx for CXXC1P1 Gene

This gene is overexpressed in Ovary (x17.4) and Testis (x12.7).

NURSA nuclear receptor signaling pathways regulating expression of CXXC1P1 Gene:


SOURCE GeneReport for Unigene cluster for CXXC1P1 Gene:

genes like me logo Genes that share expression patterns with CXXC1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CXXC1P1 Gene

Orthologs for CXXC1P1 Gene

Evolution for CXXC1P1 Gene

Gene Tree for CXXC1P1 (if available)
Gene Tree for CXXC1P1 (if available)

No data available for Orthologs for CXXC1P1 Gene

Paralogs for CXXC1P1 Gene

No data available for Paralogs for CXXC1P1 Gene

Variants for CXXC1P1 Gene

Sequence variations from dbSNP and Humsavar for CXXC1P1 Gene

SNP ID Clin Chr 0X pos Variation AA Info Type
rs1000099439 -- 47,707,964(+) A/G intron_variant
rs1000105219 -- 47,732,972(+) C/T intron_variant
rs1000237070 -- 47,736,801(+) G/A/T downstream_transcript_variant
rs1000269482 -- 47,724,841(+) C/T intron_variant
rs1000312475 -- 47,713,802(+) C/A intron_variant

Structural Variations from Database of Genomic Variants (DGV) for CXXC1P1 Gene

Variant ID Type Subtype PubMed ID
esv27279 CNV gain 19812545
esv3558858 CNV deletion 23714750
nsv6888 CNV insertion 18451855
nsv6889 CNV insertion 18451855

Additional Variant Information for CXXC1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CXXC1P1 Gene

Disorders for CXXC1P1 Gene

Additional Disease Information for CXXC1P1

No disorders were found for CXXC1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CXXC1P1 Gene

Publications for CXXC1P1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 2 3 58

Products for CXXC1P1 Gene

Sources for CXXC1P1 Gene

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