Free for academic non-profit institutions. Other users need a Commercial license

Aliases for CXCL1P1 Gene

Aliases for CXCL1P1 Gene

  • C-X-C Motif Chemokine Ligand 1 Pseudogene 1 2 3 5
  • Small Inducible Cytokine B Subfamily (Cys-X-Cys Motif), Member 1 (MGSA/GRO), Pseudogene 2 3
  • Chemokine (C-X-C Motif) Ligand 1 Pseudogene 2 3
  • Chemokine (C-X-C Motif) Ligand 1 (Melanoma Growth Stimulating Activity, Alpha) Pseudogene 3
  • CXCL1P 3
  • SCYB1P 3
  • GRO1P 3
  • MGSAP 3
  • GROP 3

External Ids for CXCL1P1 Gene

Previous HGNC Symbols for CXCL1P1 Gene

  • SCYB1P
  • CXCL1P

Summaries for CXCL1P1 Gene

GeneCards Summary for CXCL1P1 Gene

CXCL1P1 (C-X-C Motif Chemokine Ligand 1 Pseudogene 1) is a Pseudogene. Diseases associated with CXCL1P1 include Hepatocellular Carcinoma.

Additional gene information for CXCL1P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CXCL1P1 Gene

Genomics for CXCL1P1 Gene

GeneHancer (GH) Regulatory Elements for CXCL1P1 Gene

Promoters and enhancers for CXCL1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J073944 Promoter 1 Ensembl 650.7 0.0 -8 0.2 CTCF ZIC2 ZNF335 ZFHX2 GLIS2 EGR1 PATZ1 PRDM10 EZH2 EGR2 CXCL1P1 PPBP PF4V1 PIR32408
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CXCL1P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CXCL1P1 Gene

Genomic Locations for CXCL1P1 Gene
chr4:73,943,995-73,944,493
(GRCh38/hg38)
Size:
499 bases
Orientation:
Minus strand
chr4:74,809,712-74,810,210
(GRCh37/hg19)

Genomic View for CXCL1P1 Gene

Genes around CXCL1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CXCL1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CXCL1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CXCL1P1 Gene

Function for CXCL1P1 Gene

Phenotypes From GWAS Catalog for CXCL1P1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CXCL1P1 Gene

Localization for CXCL1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CXCL1P1 Gene

Pathways & Interactions for CXCL1P1 Gene

SuperPathways for CXCL1P1 Gene

No Data Available

Interacting Proteins for CXCL1P1 Gene

Gene Ontology (GO) - Biological Process for CXCL1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CXCL1P1 Gene

Drugs & Compounds for CXCL1P1 Gene

No Compound Related Data Available

Transcripts for CXCL1P1 Gene

mRNA/cDNA for CXCL1P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CXCL1P1 Gene

No ASD Table

Relevant External Links for CXCL1P1 Gene

GeneLoc Exon Structure for
CXCL1P1
ECgene alternative splicing isoforms for
CXCL1P1

Expression for CXCL1P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of CXCL1P1 Gene:

CXCL1P1
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CXCL1P1 Gene

Orthologs for CXCL1P1 Gene

Evolution for CXCL1P1 Gene

ENSEMBL:
Gene Tree for CXCL1P1 (if available)
TreeFam:
Gene Tree for CXCL1P1 (if available)

No data available for Orthologs for CXCL1P1 Gene

Paralogs for CXCL1P1 Gene

No data available for Paralogs for CXCL1P1 Gene

Variants for CXCL1P1 Gene

Additional Variant Information for CXCL1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CXCL1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CXCL1P1 Gene

Disorders for CXCL1P1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for CXCL1P1 Gene - From: LncRNADisease

Disorder Aliases PubMed IDs
hepatocellular carcinoma
  • hcc
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with CXCL1P1: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for CXCL1P1 Gene

Publications for CXCL1P1 Gene

  1. Identification and characterization of an MGSA/GRO pseudogene. (PMID: 9524820) Shattuck-Brandt RL … Richmond A (DNA sequence : the journal of DNA sequencing and mapping 1997) 2 3 58

Products for CXCL1P1 Gene

Sources for CXCL1P1 Gene

Content
Loading form....