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Aliases for CXADRP3 Gene

Aliases for CXADRP3 Gene

  • CXADR Pseudogene 3 2 3 5
  • Coxsackie Virus And Adenovirus Receptor Pseudogene 3 2 3
  • CTD-2594A10.3 3

External Ids for CXADRP3 Gene

Previous GeneCards Identifiers for CXADRP3 Gene

  • GC18M014470
  • GC18M014562
  • GC18M014649
  • GC18M014702
  • GC18M014961

Summaries for CXADRP3 Gene

GeneCards Summary for CXADRP3 Gene

CXADRP3 (CXADR Pseudogene 3) is a Pseudogene.

Additional gene information for CXADRP3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CXADRP3 Gene

Genomics for CXADRP3 Gene

GeneHancer (GH) Regulatory Elements for CXADRP3 Gene

Promoters and enhancers for CXADRP3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J014457 Enhancer 0.5 Ensembl 8 +40.8 40786 1 SKI CTCF ZNF654 RXRA ZBTB8A RARA CXADRP3 LONRF2P1 GRAMD4P7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CXADRP3 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the CXADRP3 gene promoter:
  • HTF
  • FOXD3
  • Bach2
  • Bach1
  • Evi-1
  • Lmo2

Genomic Locations for CXADRP3 Gene

Genomic Locations for CXADRP3 Gene
chr18:14,477,952-14,499,278
(GRCh38/hg38)
Size:
21,327 bases
Orientation:
Minus strand
chr18:14,477,951-14,499,277
(GRCh37/hg19)
Size:
21,327 bases
Orientation:
Minus strand

Genomic View for CXADRP3 Gene

Genes around CXADRP3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CXADRP3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CXADRP3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CXADRP3 Gene

Function for CXADRP3 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CXADRP3 Gene

Localization for CXADRP3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CXADRP3 Gene

Pathways & Interactions for CXADRP3 Gene

SuperPathways for CXADRP3 Gene

No Data Available

Interacting Proteins for CXADRP3 Gene

Gene Ontology (GO) - Biological Process for CXADRP3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CXADRP3 Gene

Drugs & Compounds for CXADRP3 Gene

No Compound Related Data Available

Transcripts for CXADRP3 Gene

mRNA/cDNA for CXADRP3 Gene

(2) Additional mRNA sequences :
(6) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CXADRP3 Gene

Coxsackie virus and adenovirus receptor pseudogene 3:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CXADRP3 Gene

No ASD Table

Relevant External Links for CXADRP3 Gene

GeneLoc Exon Structure for
CXADRP3
ECgene alternative splicing isoforms for
CXADRP3

Expression for CXADRP3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CXADRP3 Gene

mRNA differential expression in normal tissues according to GTEx for CXADRP3 Gene

This gene is overexpressed in Testis (x48.4).

NURSA nuclear receptor signaling pathways regulating expression of CXADRP3 Gene:

CXADRP3

SOURCE GeneReport for Unigene cluster for CXADRP3 Gene:

Hs.721675
genes like me logo Genes that share expression patterns with CXADRP3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CXADRP3 Gene

Orthologs for CXADRP3 Gene

Evolution for CXADRP3 Gene

ENSEMBL:
Gene Tree for CXADRP3 (if available)
TreeFam:
Gene Tree for CXADRP3 (if available)

No data available for Orthologs for CXADRP3 Gene

Paralogs for CXADRP3 Gene

No data available for Paralogs for CXADRP3 Gene

Variants for CXADRP3 Gene

Sequence variations from dbSNP and Humsavar for CXADRP3 Gene

SNP ID Clin Chr 18 pos Variation AA Info Type
rs1000042542 -- 14,477,957(-) C/T non_coding_transcript_variant
rs1000058434 -- 14,488,589(-) GTGTGTTCGTGTG/GTGTG intron_variant
rs1000099991 -- 14,483,538(-) T/C intron_variant
rs1000216866 -- 14,496,634(-) A/C intron_variant
rs1000279202 -- 14,496,157(-) C/T intron_variant

Structural Variations from Database of Genomic Variants (DGV) for CXADRP3 Gene

Variant ID Type Subtype PubMed ID
nsv978650 CNV duplication 23825009
nsv978611 CNV duplication 23825009
nsv962898 CNV duplication 23825009
nsv9615 CNV gain+loss 18304495
nsv833593 CNV gain 17160897
nsv819182 CNV insertion 19587683
nsv576531 CNV gain 21841781
nsv514861 CNV gain 21397061
esv3641898 CNV loss 21293372
esv3408282 CNV duplication 20981092
esv3400722 CNV duplication 20981092
esv2758715 CNV gain 17122850
esv2662050 CNV deletion 23128226
esv22403 CNV gain+loss 19812545
dgv1858e59 CNV duplication 20981092

Additional Variant Information for CXADRP3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CXADRP3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CXADRP3 Gene

Disorders for CXADRP3 Gene

Additional Disease Information for CXADRP3

No disorders were found for CXADRP3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CXADRP3 Gene

Publications for CXADRP3 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for CXADRP3 Gene

Sources for CXADRP3 Gene

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