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This gene encodes a factor that is part of the multi-protein C complex involved in pre-mRNA splicing. Alternatively spliced transcripts have been described for this gene. [provided by RefSeq, Nov 2012]
CWC25 (CWC25 Spliceosome Associated Protein Homolog) is a Protein Coding gene. Among its related pathways are Gene Expression and mRNA Splicing - Major Pathway.
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0005634 | nucleus | IEA,IDA | 29301961 |
GO:0005654 | nucleoplasm | TAS | -- |
GO:0005681 | spliceosomal complex | IEA | -- |
GO:0005684 | U2-type spliceosomal complex | IBA | 21873635 |
GO:0016607 | nuclear speck | IDA | -- |
SuperPathway | Contained pathways | ||
---|---|---|---|
1 | mRNA Splicing - Major Pathway |
.79
|
|
2 | Gene Expression |
.48
|
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0000398 | mRNA splicing, via spliceosome | TAS | -- |
GO:0006397 | mRNA processing | IEA | -- |
GO:0008380 | RNA splicing | IEA | -- |
This gene was present in the common ancestor of chordates.
Organism | Taxonomy | Gene | Similarity | Type | Details |
---|---|---|---|---|---|
Chimpanzee (Pan troglodytes) |
Mammalia | CWC25 30 |
|
||
Cow (Bos Taurus) |
Mammalia | CWC25 30 |
|
||
Dog (Canis familiaris) |
Mammalia | CWC25 30 |
|
||
Mouse (Mus musculus) |
Mammalia | Cwc25 30 17 |
|
||
Rat (Rattus norvegicus) |
Mammalia | Cwc25 30 |
|
||
Chicken (Gallus gallus) |
Aves | CWC25 30 |
|
||
Tropical Clawed Frog (Silurana tropicalis) |
Amphibia | cwc25 30 |
|
||
Str.17687 30 |
|
||||
African clawed frog (Xenopus laevis) |
Amphibia | AF549897-prov 30 |
|
||
Zebrafish (Danio rerio) |
Actinopterygii | cwc25 30 |
|
||
Dr.5534 30 |
|
||||
Rainbow Trout (Oncorhynchus mykiss) |
Actinopterygii | Omy.9008 30 |
|
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
esv1005760 | CNV | deletion | 20482838 |
esv2668927 | CNV | deletion | 23128226 |
esv2715898 | CNV | deletion | 23290073 |
esv3554395 | CNV | deletion | 23714750 |
esv3554396 | CNV | deletion | 23714750 |
esv3640530 | CNV | loss | 21293372 |
nsv1146669 | OTHER | inversion | 26484159 |
nsv1153975 | CNV | deletion | 26484159 |
nsv512485 | CNV | loss | 21212237 |
nsv827983 | CNV | loss | 20364138 |
nsv833438 | CNV | loss | 17160897 |
nsv833439 | CNV | loss | 17160897 |
No disorders were found for CWC25 Gene.