Aliases for CUBNP2 Gene
Aliases for CUBNP2 Gene
External Ids for CUBNP2 Gene
- HGNC: 44984
- Entrez Gene: 100289280
- Ensembl: ENSG00000234993
Previous GeneCards Identifiers for CUBNP2 Gene
- GC10M045729
Summaries for CUBNP2 Gene
GeneCards Summary for CUBNP2 Gene
CUBNP2 (Cubilin Pseudogene 2) is a Pseudogene.
Additional gene information for CUBNP2 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CUBNP2 Gene
Genomics for CUBNP2 Gene
GeneHancer (GH) Regulatory Elements for CUBNP2 Gene
Promoters and enhancers for CUBNP2 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH10J045249 | Enhancer | 0.9 | ENCODE | 0.7 | -3.0 | -3014 | 0.9 | ZNF384 CTCF SP7 ZNF680 RAD21 IKZF1 RFX1 ZNF600 PRDM10 ZNF512 | AGAP4 ALOX5 CUBNP2 OR6D1P | |
| GH10J045236 | Enhancer | 1.2 | FANTOM5 Ensembl ENCODE | 0.4 | +11.4 | 11361 | 2 | ELF3 CC2D1A CTCF ZSCAN21 SP7 RAD21 CREB1 IKZF1 ZBTB8A ZIC2 | ENSG00000227683 AGAP4 OR13A1 DEPP1 CUBNP2 ENSG00000278531 | |
| GH10J045241 | Enhancer | 0.6 | Ensembl | 0.4 | +5.5 | 5461 | 1.4 | TRIM24 SMARCA4 MGA LEF1 DPF2 CEBPG CEBPB TCF12 ZFP91 PRDM10 | OR13A1 RSU1P2 ENSG00000227683 CUBNP2 ENSG00000278531 | |
| GH10J045253 | Enhancer | 0.5 | Ensembl | 0.4 | -6.3 | -6340 | 1.4 | RELA RUNX3 BCL11A JUNB BATF KDM1A | OR6D1P LOC102724323 ENSG00000227683 OR13A1 AGAP4 CUBNP2 | |
| GH10J045227 | Enhancer | 0.4 | Ensembl | 0.4 | +19.8 | 19760 | 1.2 | REST EHMT2 | ENSG00000227683 OR13A1 CUBNP2 ENSG00000278531 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around CUBNP2 on UCSC Golden Path with GeneCards custom track
Genomic Locations for CUBNP2 Gene
Genomic Locations for CUBNP2 Gene
- chr10:45,232,018-45,247,361
- (GRCh38/hg38)
- Size:
- 15,344 bases
- Orientation:
- Minus strand
- chr10:45,727,466-45,742,809
- (GRCh37/hg19)
- Size:
- 15,344 bases
- Orientation:
- Minus strand
Genomic View for CUBNP2 Gene
Genes around CUBNP2 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 10q11.21 by HGNC
- 10q11.21 by Entrez Gene
- 10q11.21 by Ensembl
CUBNP2 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for CUBNP2 Gene
Proteins for CUBNP2 Gene
Post-translational modifications for CUBNP2 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for CUBNP2
- Origene Custom Protein Services for CUBNP2
No data available for DME Specific Peptides for CUBNP2 Gene
Domains & Families for CUBNP2 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CUBNP2 Gene
Function for CUBNP2 Gene
Phenotypes From GWAS Catalog for CUBNP2 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for CUBNP2
-
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CUBNP2 Gene
Localization for CUBNP2 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CUBNP2 Gene
Transcripts for CUBNP2 Gene
mRNA/cDNA for CUBNP2 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000443534 1139 bps (ENST00000443534.1)
CRISPR Products
- Browse CRISPR knockouts for CUBNP2
miRNA Products
Inhibitory RNA Products
Clone Products
Expression for CUBNP2 Gene
mRNA differential expression in normal tissues according to GTEx for CUBNP2 Gene
This gene is overexpressed in Testis (x13.5), Esophagus - Mucosa (x7.0), Brain - Anterior cingulate cortex (BA24) (x6.2), and Cervix - Ectocervix (x5.8).
NURSA nuclear receptor signaling pathways regulating expression of CUBNP2 Gene:
CUBNP2
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CUBNP2 Gene
Orthologs for CUBNP2 Gene
No data available for Orthologs for CUBNP2 Gene
Paralogs for CUBNP2 Gene
No data available for Paralogs for CUBNP2 Gene
Variants for CUBNP2 Gene
Additional Variant Information for CUBNP2 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- CUBNP2
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CUBNP2 Gene
Disorders for CUBNP2 Gene
No disorders were found for CUBNP2 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CUBNP2 Gene
Publications for CUBNP2 Gene
No publications were found for CUBNP2 Gene.
No data available for External Links for CUBNP2 Gene
Products for CUBNP2 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for CUBNP2
- Origene Custom Protein Services for CUBNP2
- Browse OriGene Inhibitory RNA Products For CUBNP2
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for CUBNP2
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For CUBNP2
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Cyagen custom Knockout/knockin (KOKI) mouse models for CUBNP2
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for CUBNP2
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for CUBNP2
- Search GeneCopoeia for miRNA 3'UTR Target clone products for CUBNP2
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for CUBNP2
Sources for CUBNP2 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) UniGene
- (28) AceView
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) HGMD
- (45) GAD
- (46) BGMUT
- (47) HuGE
- (48) Atlas
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) OCA
- (69) Proteopedia
- (70) MOPED
- (71) neXtProt
- (72) Reactome
- (73) GeneGo (Thomson Reuters)
- (74) fRNAdb
- (75) DISEASES
- (76) SIMAP
- (77) GenomeRNAi
- (78) LifeMap
- (79) miRTarBase
- (80) MalaCards
- (81) Invitrogen
- (82) BitterDB
- (83) ESI-BIO
- (84) RefSeq
- (85) BioSystems
- (86) MaxQB
- (87) IUPHAR
- (88) BioGPS
- (89) Illumina
- (90) COMPARTMENTS
- (91) HOMER
- (92) PaxDb
- (93) ApexBio
- (94) Addgene
- (95) antibodies-online
- (96) CYP
- (97) NONCODE
- (98) SwitchGear Genomics
- (99) TreeFam
- (100) PathCards
- (101) GeneReviews
- (102) GeneTex
- (103) Taconic Biosciences
- (104) GTEx
- (105) ProteomicsDB
- (106) SCBT
- (107) DGIdb
- (108) ClinicalTrials
- (109) FDA Approved Drugs
- (110) RVIS
- (111) SIGNOR
- (112) diseasecard
- (113) NIH Rare Diseases
- (114) Orphanet
- (115) UMLS
- (116) GTR
- (117) Disease Ontology
- (118) Genetics Home Reference
- (119) MeSH
- (120) MedlinePlus
- (121) CDC
- (122) NINDS
- (123) NCBI Bookshelf
- (124) ClinVar
- (125) Gene Damage Index
- (126) ViGene Biosciences
- (127) HPO
- (128) UDN
- (129) VISTA
- (130) FANTOM5
- (131) ENCODE
- (132) ProSci
- (133) Horizon
- (134) NURSA
- (135) IID
- (136) Cyagen
- (137) VectorBuilder
- (138) SNPedia
- (139) BRCA Exchange
- (140) St John's Lab
- (141) CIViC
- (142) ProteoGenix
- (143) dbSUPER
- (144) TISSUES
- (145) Gene ORGANizer
- (146) abm
- (147) CrownBio
- (148) Human Protein Atlas
- (149) GWAS Catalog
- (150) Monarch Initiative
- (151) DataMed
- (152) HumanCyc
- (153) genomics-online
- (154) UCNEbase
- (155) EPDnew
- (156) Applied Biosystems
- (157) GlyConnect
- (158) Aminode
- (159) GeneCopoeia
- (160) GPS-Prot
- (161) RNACentral
- (162) LncRNADisease
- (163) LOVD
- (164) miR2Disease
- (165) DiseaseEnhancer
- (166) Boster Bio
- (167) Biorbyt
- (168) Biocompare
- (169) Mastermind