Aliases for CTSLP8 Gene

Aliases for CTSLP8 Gene

  • Cathepsin L Pseudogene 8 2 3 5
  • Cathepsin L1 Pseudogene 8 2 3
  • CTSL1P8 3

External Ids for CTSLP8 Gene

Previous HGNC Symbols for CTSLP8 Gene

  • CTSL1P8

Previous GeneCards Identifiers for CTSLP8 Gene

  • GC09P090462

Summaries for CTSLP8 Gene

GeneCards Summary for CTSLP8 Gene

CTSLP8 (Cathepsin L Pseudogene 8) is a Pseudogene.

Additional gene information for CTSLP8 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CTSLP8 Gene

Genomics for CTSLP8 Gene

GeneHancer (GH) Regulatory Elements for CTSLP8 Gene

Promoters and enhancers for CTSLP8 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J087837 Enhancer 0.2 Ensembl 0.4 -6.8 -6835 0.6 FBP2P1 lnc-CDK20-9 ENSG00000234460 ENSG00000214888 CTSLP8 RF00017-7681
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CTSLP8 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CTSLP8 Gene

Genomic Locations for CTSLP8 Gene
chr9:87,844,154-87,847,424
(GRCh38/hg38)
Size:
3,271 bases
Orientation:
Plus strand
chr9:90,459,067-90,462,339
(GRCh37/hg19)
Size:
3,273 bases
Orientation:
Plus strand

Genomic View for CTSLP8 Gene

Genes around CTSLP8 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CTSLP8 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CTSLP8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CTSLP8 Gene

Proteins for CTSLP8 Gene

Post-translational modifications for CTSLP8 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CTSLP8 Gene

Domains & Families for CTSLP8 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CTSLP8 Gene

Function for CTSLP8 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CTSLP8 Gene

Localization for CTSLP8 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CTSLP8 Gene

Pathways & Interactions for CTSLP8 Gene

PathCards logo

SuperPathways for CTSLP8 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for CTSLP8 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CTSLP8 Gene

Drugs & Compounds for CTSLP8 Gene

No Compound Related Data Available

Transcripts for CTSLP8 Gene

mRNA/cDNA for CTSLP8 Gene

2 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for CTSLP8 Gene

No ASD Table

Relevant External Links for CTSLP8 Gene

GeneLoc Exon Structure for
CTSLP8

Expression for CTSLP8 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CTSLP8 Gene

mRNA differential expression in normal tissues according to GTEx for CTSLP8 Gene

This gene is overexpressed in Testis (x12.3), Brain - Hippocampus (x11.6), Kidney - Cortex (x10.4), and Lung (x5.2).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for CTSLP8

genes like me logo Genes that share expression patterns with CTSLP8: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CTSLP8 Gene

Orthologs for CTSLP8 Gene

Evolution for CTSLP8 Gene

ENSEMBL:
Gene Tree for CTSLP8 (if available)
TreeFam:
Gene Tree for CTSLP8 (if available)

No data available for Orthologs for CTSLP8 Gene

Paralogs for CTSLP8 Gene

No data available for Paralogs for CTSLP8 Gene

Variants for CTSLP8 Gene

Structural Variations from Database of Genomic Variants (DGV) for CTSLP8 Gene

Variant ID Type Subtype PubMed ID
nsv518978 CNV loss 19592680
nsv614788 CNV gain 21841781
nsv968719 CNV duplication 23825009

Additional Variant Information for CTSLP8 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CTSLP8

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) and Variation tolerance for CTSLP8 Gene

Disorders for CTSLP8 Gene

Additional Disease Information for CTSLP8

No disorders were found for CTSLP8 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CTSLP8 Gene

Publications for CTSLP8 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 54
  2. The DNA sequence and comparative analysis of human chromosome 10. (PMID: 15164054) Deloukas P … Rogers J (Nature 2004) 3 54
  3. A novel family of cathepsin L-like (CTSLL) sequences on human chromosome 10q and related transcripts. (PMID: 7713509) Bryce SD … Lunec J (Genomics 1994) 3 54

Products for CTSLP8 Gene

Sources for CTSLP8 Gene