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Aliases for CTSLP6 Gene

Aliases for CTSLP6 Gene

  • Cathepsin L Pseudogene 6 2 3 5
  • Cathepsin L1 Pseudogene 6 2 3
  • Cathepsin L-Like 6 2 3
  • BA479O17.1 3
  • CTSL1P6 3
  • CTSLL6 3

External Ids for CTSLP6 Gene

Previous HGNC Symbols for CTSLP6 Gene

  • CTSLL6
  • CTSL1P6

Previous GeneCards Identifiers for CTSLP6 Gene

  • GC10M081630

Summaries for CTSLP6 Gene

GeneCards Summary for CTSLP6 Gene

CTSLP6 (Cathepsin L Pseudogene 6) is a Pseudogene.

Additional gene information for CTSLP6 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CTSLP6 Gene

Genomics for CTSLP6 Gene

GeneHancer (GH) Regulatory Elements for CTSLP6 Gene

Promoters and enhancers for CTSLP6 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I079904 Promoter/Enhancer 1.4 Ensembl ENCODE 12.9 -31.2 -31186 1.8 ZNF76 ZBTB40 ZNF2 YY1 ZNF335 GLIS2 ZNF213 SCRT2 ZNF143 KLF7 BMS1P21 ENSG00000283913 SFTPD MBL1P CTSLP6 SFTPD-AS1 NUTM2B
GH10I079936 Enhancer 1.1 FANTOM5 Ensembl ENCODE 9.9 -64.4 -64387 3.9 MAX IRF4 CTBP1 POLR2A EGR1 ATF7 ETV6 IKZF2 SMARCE1 NRF1 SFTPD MBL1P ANXA11 SFTPA2 CTSLP6 LINC00857 SFTPD-AS1 NUTM2B ENSG00000283913
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CTSLP6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CTSLP6 Gene

Genomic Locations for CTSLP6 Gene
chr10:79,870,051-79,873,915
(GRCh38/hg38)
Size:
3,865 bases
Orientation:
Minus strand
chr10:81,629,807-81,633,668
(GRCh37/hg19)

Genomic View for CTSLP6 Gene

Genes around CTSLP6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CTSLP6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CTSLP6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CTSLP6 Gene

Proteins for CTSLP6 Gene

Post-translational modifications for CTSLP6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CTSLP6 Gene

Domains & Families for CTSLP6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CTSLP6 Gene

Function for CTSLP6 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CTSLP6 Gene

Localization for CTSLP6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CTSLP6 Gene

Pathways & Interactions for CTSLP6 Gene

SuperPathways for CTSLP6 Gene

No Data Available

Interacting Proteins for CTSLP6 Gene

Gene Ontology (GO) - Biological Process for CTSLP6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CTSLP6 Gene

Drugs & Compounds for CTSLP6 Gene

No Compound Related Data Available

Transcripts for CTSLP6 Gene

mRNA/cDNA for CTSLP6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CTSLP6 Gene

No ASD Table

Relevant External Links for CTSLP6 Gene

GeneLoc Exon Structure for
CTSLP6
ECgene alternative splicing isoforms for
CTSLP6

Expression for CTSLP6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CTSLP6 Gene

mRNA differential expression in normal tissues according to GTEx for CTSLP6 Gene

This gene is overexpressed in Testis (x34.1), Pancreas (x4.6), and Kidney - Cortex (x4.4).

NURSA nuclear receptor signaling pathways regulating expression of CTSLP6 Gene:

CTSLP6
genes like me logo Genes that share expression patterns with CTSLP6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CTSLP6 Gene

Orthologs for CTSLP6 Gene

Evolution for CTSLP6 Gene

ENSEMBL:
Gene Tree for CTSLP6 (if available)
TreeFam:
Gene Tree for CTSLP6 (if available)

No data available for Orthologs for CTSLP6 Gene

Paralogs for CTSLP6 Gene

No data available for Paralogs for CTSLP6 Gene

Variants for CTSLP6 Gene

Additional Variant Information for CTSLP6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CTSLP6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CTSLP6 Gene

Disorders for CTSLP6 Gene

No disorders were found for CTSLP6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CTSLP6 Gene

Publications for CTSLP6 Gene

  1. The DNA sequence and comparative analysis of human chromosome 10. (PMID: 15164054) Deloukas P … Rogers J (Nature 2004) 3 58

Products for CTSLP6 Gene

Sources for CTSLP6 Gene

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