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Aliases for CTSLP4 Gene
Aliases for CTSLP4 Gene
External Ids for CTSLP4 Gene
- HGNC: 23645
- Entrez Gene: 644496
- Ensembl: ENSG00000230011
Previous HGNC Symbols for CTSLP4 Gene
- CTSLL4
- CTSL1P4
Previous GeneCards Identifiers for CTSLP4 Gene
- GC10M052464
Summaries for CTSLP4 Gene
GeneCards Summary for CTSLP4 Gene
CTSLP4 (Cathepsin L Pseudogene 4) is a Pseudogene.
Additional gene information for CTSLP4 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CTSLP4 Gene
Genomics for CTSLP4 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for CTSLP4 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH10J050704 | Enhancer | 0.4 | Ensembl | 0.7 | +4.2 | 4217 | 0.2 | NFIC KDM1A CBFA2T3 | CTSLP4 piR-35193-001 ASAH2B SGMS1 | |
| GH10J050701 | Enhancer | 0.3 | Ensembl | 0.4 | +7.0 | 7017 | 1 | ETV1 GABPB1 | SGMS1-AS1 CTSLP4 piR-35193-001 ASAH2B SGMS1 | |
| GH10J050723 | Enhancer | 0.4 | Ensembl | 0.4 | -15.1 | -15083 | 0.4 | TCF12 IKZF2 IKZF1 | ASAH2 lnc-A1CF-7 ASAH2B CTSLP4 SGMS1 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around CTSLP4 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for CTSLP4 Gene
Genomic Locations for CTSLP4 Gene
- chr10:50,704,658-50,708,918
- (GRCh38/hg38)
- Size:
- 4,261 bases
- Orientation:
- Minus strand
- chr10:52,464,418-52,468,675
- (GRCh37/hg19)
- Size:
- 4,258 bases
- Orientation:
- Minus strand
Genomic View for CTSLP4 Gene
Genes around CTSLP4 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 10q11.23 by HGNC
- 10q11.23 by Entrez Gene
- 10q11.23 by Ensembl
CTSLP4 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for CTSLP4 Gene
Proteins for CTSLP4 Gene
Post-translational modifications for CTSLP4 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for CTSLP4
- Origene Custom Protein Services for CTSLP4
No data available for DME Specific Peptides for CTSLP4 Gene
Domains & Families for CTSLP4 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CTSLP4 Gene
Function for CTSLP4 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for CTSLP4 - Select products 50% OFF >
- * CTSLP4 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for CTSLP4
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CTSLP4 Gene
Localization for CTSLP4 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CTSLP4 Gene
Transcripts for CTSLP4 Gene
mRNA/cDNA for CTSLP4 Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000454614 1002 nts (view in UCSC)
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for CTSLP4 - Select products 50% OFF >
- * CTSLP4 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for CTSLP4
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for CTSLP4 Gene
- GeneLoc Exon Structure for
- CTSLP4
Expression for CTSLP4 Gene
mRNA differential expression in normal tissues according to GTEx for CTSLP4 Gene
This gene is overexpressed in Testis (x28.7), Pancreas (x8.9), Thyroid (x7.0), and Heart - Left Ventricle (x4.3).
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CTSLP4 Gene
Orthologs for CTSLP4 Gene
No data available for Orthologs for CTSLP4 Gene
Paralogs for CTSLP4 Gene
No data available for Paralogs for CTSLP4 Gene
Variants for CTSLP4 Gene
Additional Variant Information for CTSLP4 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- CTSLP4
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CTSLP4 Gene
Disorders for CTSLP4 Gene
No disorders were found for CTSLP4 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CTSLP4 Gene
Publications for CTSLP4 Gene
- CA/C1 peptidases of the malaria parasites Plasmodium falciparum and P. berghei and their mammalian hosts--a bioinformatical analysis. (PMID: 19663681) Xiao K … Dandekar T (Biological chemistry 2009) 2 3
No data available for Mastermind for CTSLP4 Gene
Products for CTSLP4 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for CTSLP4
- Origene Custom Protein Services for CTSLP4
- Browse OriGene Inhibitory RNA Products For CTSLP4
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for CTSLP4
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For CTSLP4
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for CTSLP4
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for CTSLP4
- Search GeneCopoeia for miRNA 3'UTR Target clone products for CTSLP4
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for CTSLP4
Sources for CTSLP4 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB