Aliases for CTSLP3 Gene

Aliases for CTSLP3 Gene

  • Cathepsin L Pseudogene 3 2 3 5
  • Cathepsin L1 Pseudogene 3 2 3
  • Cathepsin L-Like 3 2 3
  • CTSL1P3 3
  • CTSLL3 3
  • CTSLP3 5

External Ids for CTSLP3 Gene

Previous HGNC Symbols for CTSLP3 Gene

  • CTSLL3
  • CTSL1P3

Previous GeneCards Identifiers for CTSLP3 Gene

  • GC10M048984

Summaries for CTSLP3 Gene

GeneCards Summary for CTSLP3 Gene

CTSLP3 (Cathepsin L Pseudogene 3) is a Pseudogene.

Additional gene information for CTSLP3 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CTSLP3 Gene

Genomics for CTSLP3 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for CTSLP3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J046753 Enhancer 0.2 Ensembl 600.7 +0.5 495 0.6 CTSLP3 lnc-PTPN20-7 PTPN20 SYT15
GH10J046756 Promoter 0.3 Ensembl 0.7 +3.5 3495 1 lnc-PTPN20-7 CTSLP3 PTPN20 SYT15
GH10J046740 Promoter 0.3 EPDnew 0.4 -13.0 -13044 0.1 FAM245B CTSLP3 SYT15 PTPN20
GH10J046723 Enhancer 0.2 Ensembl 0.3 -29.8 -29804 0.4 FAM245B NONHSAG005817.2-001 CTSLP3 SYT15 PTPN20
GH10J046721 Enhancer 0.2 Ensembl 0.3 -32.5 -32504 0.2 FAM245B NONHSAG005817.2-001 CTSLP3 SYT15 PTPN20
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CTSLP3 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for CTSLP3 Gene

Genomic Locations for CTSLP3 Gene
chr10:46,753,605-46,759,740
(GRCh38/hg38)
Size:
6,136 bases
Orientation:
Plus strand
chr10:48,980,162-48,981,273
(GRCh37/hg19)
Size:
1,112 bases
Orientation:
Minus strand

Genomic View for CTSLP3 Gene

Genes around CTSLP3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CTSLP3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CTSLP3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CTSLP3 Gene

Proteins for CTSLP3 Gene

Post-translational modifications for CTSLP3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CTSLP3 Gene

Domains & Families for CTSLP3 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CTSLP3 Gene

Function for CTSLP3 Gene

Animal Model Products

  • Taconic Biosciences Mouse Models for CTSLP3

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CTSLP3 Gene

Localization for CTSLP3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CTSLP3 Gene

Pathways & Interactions for CTSLP3 Gene

PathCards logo

SuperPathways for CTSLP3 Gene

No Data Available

Gene Ontology (GO) - Biological Process for CTSLP3 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CTSLP3 Gene

Drugs & Compounds for CTSLP3 Gene

No Compound Related Data Available

Transcripts for CTSLP3 Gene

mRNA/cDNA for CTSLP3 Gene

3 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for CTSLP3 Gene

No ASD Table

Relevant External Links for CTSLP3 Gene

GeneLoc Exon Structure for
CTSLP3

Expression for CTSLP3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CTSLP3 Gene

mRNA differential expression in normal tissues according to GTEx for CTSLP3 Gene

This gene is overexpressed in Liver (x7.2), Pancreas (x5.6), Kidney - Cortex (x5.4), and Thyroid (x4.9).
genes like me logo Genes that share expression patterns with CTSLP3: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CTSLP3 Gene

Orthologs for CTSLP3 Gene

Evolution for CTSLP3 Gene

ENSEMBL:
Gene Tree for CTSLP3 (if available)
TreeFam:
Gene Tree for CTSLP3 (if available)

No data available for Orthologs for CTSLP3 Gene

Paralogs for CTSLP3 Gene

No data available for Paralogs for CTSLP3 Gene

Variants for CTSLP3 Gene

Additional Variant Information for CTSLP3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CTSLP3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CTSLP3 Gene

Disorders for CTSLP3 Gene

No disorders were found for CTSLP3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CTSLP3 Gene

Publications for CTSLP3 Gene

  1. A novel family of cathepsin L-like (CTSLL) sequences on human chromosome 10q and related transcripts. (PMID: 7713509) Bryce SD … Lunec J (Genomics 1994) 2 3

Products for CTSLP3 Gene

Sources for CTSLP3 Gene