Free for academic non-profit institutions. Other users need a Commercial license

Aliases for CTNNA1P1 Gene

Aliases for CTNNA1P1 Gene

  • Catenin Alpha 1 Pseudogene 1 2 3 5
  • Catenin (Cadherin-Associated Protein), Alpha 1 Pseudogene 1 2 3
  • Catenin (Cadherin-Associated Protein), Alpha Pseudogene 1 2 3
  • CTNNAP1 3

External Ids for CTNNA1P1 Gene

Previous HGNC Symbols for CTNNA1P1 Gene


Previous GeneCards Identifiers for CTNNA1P1 Gene

  • GC05M114753

Summaries for CTNNA1P1 Gene

GeneCards Summary for CTNNA1P1 Gene

CTNNA1P1 (Catenin Alpha 1 Pseudogene 1) is a Pseudogene.

Additional gene information for CTNNA1P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CTNNA1P1 Gene

Genomics for CTNNA1P1 Gene

GeneHancer (GH) Regulatory Elements for CTNNA1P1 Gene

Promoters and enhancers for CTNNA1P1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I115398 Enhancer 0.4 ENCODE 0.4 -6.5 -6498 0.1 JUND POLR2A AK3P4 CTNNA1P1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CTNNA1P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CTNNA1P1 Gene

Genomic Locations for CTNNA1P1 Gene
3,418 bases
Minus strand

Genomic View for CTNNA1P1 Gene

Genes around CTNNA1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CTNNA1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CTNNA1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CTNNA1P1 Gene

Proteins for CTNNA1P1 Gene

Post-translational modifications for CTNNA1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CTNNA1P1 Gene

Domains & Families for CTNNA1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CTNNA1P1 Gene

Function for CTNNA1P1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CTNNA1P1 Gene

Localization for CTNNA1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CTNNA1P1 Gene

Pathways & Interactions for CTNNA1P1 Gene

SuperPathways for CTNNA1P1 Gene

No Data Available

Interacting Proteins for CTNNA1P1 Gene

Gene Ontology (GO) - Biological Process for CTNNA1P1 Gene


No data available for Pathways by source and SIGNOR curated interactions for CTNNA1P1 Gene

Drugs & Compounds for CTNNA1P1 Gene

No Compound Related Data Available

Transcripts for CTNNA1P1 Gene

mRNA/cDNA for CTNNA1P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CTNNA1P1 Gene

No ASD Table

Relevant External Links for CTNNA1P1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for CTNNA1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CTNNA1P1 Gene

mRNA differential expression in normal tissues according to GTEx for CTNNA1P1 Gene

This gene is overexpressed in Colon - Transverse (x19.8), Small Intestine - Terminal Ileum (x8.4), and Stomach (x4.1).

NURSA nuclear receptor signaling pathways regulating expression of CTNNA1P1 Gene:

genes like me logo Genes that share expression patterns with CTNNA1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CTNNA1P1 Gene

Orthologs for CTNNA1P1 Gene

Evolution for CTNNA1P1 Gene

Gene Tree for CTNNA1P1 (if available)
Gene Tree for CTNNA1P1 (if available)

No data available for Orthologs for CTNNA1P1 Gene

Paralogs for CTNNA1P1 Gene

No data available for Paralogs for CTNNA1P1 Gene

Variants for CTNNA1P1 Gene

Additional Variant Information for CTNNA1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CTNNA1P1 Gene

Disorders for CTNNA1P1 Gene

No disorders were found for CTNNA1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CTNNA1P1 Gene

Publications for CTNNA1P1 Gene

  1. Isolation and characterization of a human pseudogene (CTNNAP1) for alpha E-catenin (CTNNA1): assignment of the pseudogene to 5q22 and the alpha E-catenin gene to 5q31. (PMID: 7601473) Nollet F … van Roy F (Genomics 1995) 2 3 58
  2. Downregulated pseudogene CTNNAP1 promote tumor growth in human cancer by downregulating its cognate gene CTNNA1 expression. (PMID: 27487124) Chen X … Xing C (Oncotarget 2016) 3 58
  3. Structure, expression and chromosome assignment of the human catenin (cadherin-associated protein) alpha 1 gene (CTNNA1). (PMID: 8404069) Furukawa Y … Horii A (Cytogenetics and cell genetics 1994) 3 58

Products for CTNNA1P1 Gene

Sources for CTNNA1P1 Gene

Loading form....