CTBP2P6 Gene (Pseudogene)

CTBP2 Pseudogene 6

GC11P043544
GIFtS:
6
See more...

Aliases for CTBP2P6 Gene

Aliases for CTBP2P6 Gene

  • CTBP2 Pseudogene 6 2 3 5
  • C-Terminal Binding Protein 2 Pseudogene 6 2 3
  • CTBP2P6 5

External Ids for CTBP2P6 Gene

Summaries for CTBP2P6 Gene

GeneCards Summary for CTBP2P6 Gene

CTBP2P6 (CTBP2 Pseudogene 6) is a Pseudogene.

Additional gene information for CTBP2P6 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CTBP2P6 Gene

Genomics for CTBP2P6 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for CTBP2P6 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH11J043546 Promoter/Enhancer 1.3 FANTOM5 ENCODE CraniofacialAtlas 0.3 +25.7 25730 1.9 ZNF512 ZIC2 MGA CBX3 EGR1 USF1 NR2C2 MNT MYC ZFHX2 lnc-ALX4-13 lnc-TTC17-5 HSD17B12 MIR129-2 C11orf96 CTBP2P6 TTC17
GH11J043542 Enhancer 0.6 ENCODE 0.4 +20.4 20352 0.2 GATAD2A ATF7 RXRB CEBPA TEAD1 SMAD4 TFAP4 NFIL3 RARA THRB lnc-TTC17-5 CTBP2P6 HSD17B12 TTC17
GH11J043516 Enhancer 0.3 Ensembl 0.4 -5.6 -5573 0.2 ATF7 CREB1 lnc-ALX4-14 CTBP2P6 HSD17B12 TTC17
GH11J043543 Enhancer 0.3 Ensembl 0.4 +21.5 21527 0.4 EZH2 lnc-TTC17-5 CTBP2P6 HSD17B12 TTC17
GH11J043538 Enhancer 0.2 Ensembl 0.4 +16.3 16327 0.4 lnc-TTC17-5 CTBP2P6 HSD17B12 TTC17
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CTBP2P6 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for CTBP2P6 Gene

Genomic Locations for CTBP2P6 Gene
chr11:43,521,874-43,523,560
(GRCh38/hg38)
Size:
1,687 bases
Orientation:
Plus strand
chr11:43,543,526-43,544,814
(GRCh37/hg19)
Size:
1,289 bases
Orientation:
Plus strand

Genomic View for CTBP2P6 Gene

Genes around CTBP2P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CTBP2P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CTBP2P6 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for CTBP2P6 Gene

Proteins for CTBP2P6 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for CTBP2P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CTBP2P6 Gene

Domains & Families for CTBP2P6 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CTBP2P6 Gene

Function for CTBP2P6 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for CTBP2P6 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CTBP2P6 Gene

Localization for CTBP2P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CTBP2P6 Gene

Pathways & Interactions for CTBP2P6 Gene

PathCards logo

SuperPathways for CTBP2P6 Gene

No Data Available

Gene Ontology (GO) - Biological Process for CTBP2P6 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CTBP2P6 Gene

Drugs & Compounds for CTBP2P6 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for CTBP2P6 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for CTBP2P6 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CTBP2P6 Gene

No ASD Table

Relevant External Links for CTBP2P6 Gene

GeneLoc Exon Structure for
CTBP2P6

Expression for CTBP2P6 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CTBP2P6 Gene

mRNA expression in normal human tissues for CTBP2P6 Gene
mRNA expression by GTEx for CTBP2P6 Gene
genes like me logo Genes that share expression patterns with CTBP2P6: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CTBP2P6 Gene

Orthologs for CTBP2P6 Gene

Evolution for CTBP2P6 Gene

ENSEMBL:
Gene Tree for CTBP2P6 (if available)
TreeFam:
Gene Tree for CTBP2P6 (if available)

No data available for Orthologs for CTBP2P6 Gene

Paralogs for CTBP2P6 Gene

No data available for Paralogs for CTBP2P6 Gene

Variants for CTBP2P6 Gene

Additional Variant Information for CTBP2P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CTBP2P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CTBP2P6 Gene

Disorders for CTBP2P6 Gene

No disorders were found for CTBP2P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CTBP2P6 Gene

Publications for CTBP2P6 Gene

No publications were found for CTBP2P6 Gene.

No data available for Mastermind for CTBP2P6 Gene

Products for CTBP2P6 Gene

Sources for CTBP2P6 Gene