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Aliases for CTB-41I6.1 Gene

Subcategory (RNA class) for CTB-41I6.1 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for CTB-41I6.1 Gene

  • Uncharacterized CTB-41I6.1 3
  • CTB-41I6.2 3

External Ids for CTB-41I6.1 Gene

Previous GeneCards Identifiers for CTB-41I6.1 Gene

  • GC17P008968
  • GC17P008971
  • GC17P008972
  • GC17P008973
  • GC17P008974
  • GC17P008975

Summaries for CTB-41I6.1 Gene

GeneCards Summary for CTB-41I6.1 Gene

CTB-41I6.1 (Uncharacterized CTB-41I6.1) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for CTB-41I6.1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CTB-41I6.1 Gene

Genomics for CTB-41I6.1 Gene

GeneHancer (GH) Regulatory Elements for CTB-41I6.1 Gene

Promoters and enhancers for CTB-41I6.1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I008962 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 550.8 -0.6 -567 4.6 PKNOX1 RB1 SIN3A BATF KLF5 GLIS2 ZNF207 ZNF143 ATF7 IKZF2 PIK3R5 ENSG00000266389 CTB-41I6.1 SPDYE4 ENSG00000265975 GC17M008877
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CTB-41I6.1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CTB-41I6.1 Gene

Genomic Locations for CTB-41I6.1 Gene
chr17:8,965,780-8,968,423
(GRCh38/hg38)
Size:
2,644 bases
Orientation:
Plus strand

Genomic View for CTB-41I6.1 Gene

Genes around CTB-41I6.1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CTB-41I6.1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CTB-41I6.1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CTB-41I6.1 Gene

Proteins for CTB-41I6.1 Gene

Post-translational modifications for CTB-41I6.1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CTB-41I6.1 Gene

Domains & Families for CTB-41I6.1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CTB-41I6.1 Gene

Function for CTB-41I6.1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CTB-41I6.1 Gene

Localization for CTB-41I6.1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CTB-41I6.1 Gene

Pathways & Interactions for CTB-41I6.1 Gene

SuperPathways for CTB-41I6.1 Gene

No Data Available

Interacting Proteins for CTB-41I6.1 Gene

Gene Ontology (GO) - Biological Process for CTB-41I6.1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CTB-41I6.1 Gene

Drugs & Compounds for CTB-41I6.1 Gene

No Compound Related Data Available

Transcripts for CTB-41I6.1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for CTB-41I6.1 Gene

No ASD Table

Relevant External Links for CTB-41I6.1 Gene

GeneLoc Exon Structure for
CTB-41I6.1

No data available for mRNA/cDNA for CTB-41I6.1 Gene

Expression for CTB-41I6.1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CTB-41I6.1 Gene

Orthologs for CTB-41I6.1 Gene

No data available for Orthologs and Evolution for CTB-41I6.1 Gene

Paralogs for CTB-41I6.1 Gene

No data available for Paralogs for CTB-41I6.1 Gene

Variants for CTB-41I6.1 Gene

Sequence variations from dbSNP and Humsavar for CTB-41I6.1 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000048618 -- 8,967,111(+) C/A non_coding_transcript_variant
rs1000088202 -- 8,971,262(+) G/A genic_downstream_transcript_variant, intron_variant
rs1000498316 -- 8,965,907(+) C/T non_coding_transcript_variant
rs1000644694 -- 8,965,512(+) C/T upstream_transcript_variant
rs1000673096 -- 8,971,710(+) A/T genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for CTB-41I6.1 Gene

Disorders for CTB-41I6.1 Gene

No disorders were found for CTB-41I6.1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CTB-41I6.1 Gene

Publications for CTB-41I6.1 Gene

No publications were found for CTB-41I6.1 Gene.

Products for CTB-41I6.1 Gene

Sources for CTB-41I6.1 Gene

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