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Aliases for CTAGE3P Gene

Aliases for CTAGE3P Gene

  • CTAGE Family Member 3, Pseudogene 2 3 5
  • Cutaneous T-Cell Lymphoma-Associated Antigen 3 2 3
  • CTAGE3 3 4
  • CTAGE Family, Member 3, Pseudogene 2
  • CTAGE Family, Member 3 2
  • Protein CTAGE-3 4
  • CTAGE-3 3

External Ids for CTAGE3P Gene

Previous HGNC Symbols for CTAGE3P Gene

  • CTAGE3

Previous GeneCards Identifiers for CTAGE3P Gene

  • GC13M052483

Summaries for CTAGE3P Gene

GeneCards Summary for CTAGE3P Gene

CTAGE3P (CTAGE Family Member 3, Pseudogene) is a Pseudogene. Diseases associated with CTAGE3P include Cutaneous T Cell Lymphoma.

UniProtKB/Swiss-Prot for CTAGE3P Gene

  • Tumor-associated antigen.

Additional gene information for CTAGE3P Gene

No data available for Entrez Gene Summary , CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CTAGE3P Gene

Genomics for CTAGE3P Gene

GeneHancer (GH) Regulatory Elements for CTAGE3P Gene

Promoters and enhancers for CTAGE3P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13I052193 Promoter/Enhancer 2.1 FANTOM5 Ensembl ENCODE dbSUPER 12.2 -284.0 -284039 2.7 MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 MRPS31P5 ALG11 RPS4XP16 UTP14C SUGT1 CKAP2 INTS6 SERPINE3 INTS6-AS1 TPTE2P2
GH13I051920 Enhancer 0.3 ENCODE 0.4 -10.3 -10279 0.2 RELA ENSG00000279677 CTAGE3P ATP7B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CTAGE3P on UCSC Golden Path with GeneCards custom track

Genomic Locations for CTAGE3P Gene

Genomic Locations for CTAGE3P Gene
chr13:51,907,820-51,910,621
(GRCh38/hg38)
Size:
2,802 bases
Orientation:
Minus strand
chr13:52,481,956-52,484,757
(GRCh37/hg19)

Genomic View for CTAGE3P Gene

Genes around CTAGE3P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CTAGE3P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CTAGE3P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CTAGE3P Gene

Proteins for CTAGE3P Gene

  • Protein details for CTAGE3P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8IX95-CTGE3_HUMAN
    Recommended name:
    Putative cTAGE family member 3
    Protein Accession:
    Q8IX95

    Protein attributes for CTAGE3P Gene

    Size:
    158 amino acids
    Molecular mass:
    18015 Da
    Quaternary structure:
    No Data Available
    Miscellaneous:
    • Tumor-associated antigen found in several cutaneous T-cell lymphoma (CTCL). Expressed in 4 of 11 Mycosis fungoides tissues and in a T-zone lymphoma.

neXtProt entry for CTAGE3P Gene

Post-translational modifications for CTAGE3P Gene

No Post-translational modifications

No data available for DME Specific Peptides for CTAGE3P Gene

Domains & Families for CTAGE3P Gene

Gene Families for CTAGE3P Gene

Protein Domains for CTAGE3P Gene

ProtoNet:

Suggested Antigen Peptide Sequences for CTAGE3P Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8IX95

UniProtKB/Swiss-Prot:

CTGE3_HUMAN :
  • Belongs to the cTAGE family.
Family:
  • Belongs to the cTAGE family.
genes like me logo Genes that share domains with CTAGE3P: view

Function for CTAGE3P Gene

Molecular function for CTAGE3P Gene

UniProtKB/Swiss-Prot Function:
Tumor-associated antigen.

Animal Model Products

Clone Products

No data available for Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CTAGE3P Gene

Localization for CTAGE3P Gene

Gene Ontology (GO) - Cellular Components for CTAGE3P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005575 cellular_component ND --
genes like me logo Genes that share ontologies with CTAGE3P: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for CTAGE3P Gene

Pathways & Interactions for CTAGE3P Gene

SuperPathways for CTAGE3P Gene

No Data Available

Interacting Proteins for CTAGE3P Gene

Gene Ontology (GO) - Biological Process for CTAGE3P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0008150 biological_process ND --
genes like me logo Genes that share ontologies with CTAGE3P: view

No data available for Pathways by source and SIGNOR curated interactions for CTAGE3P Gene

Drugs & Compounds for CTAGE3P Gene

No Compound Related Data Available

Transcripts for CTAGE3P Gene

mRNA/cDNA for CTAGE3P Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CTAGE3P Gene

No ASD Table

Relevant External Links for CTAGE3P Gene

GeneLoc Exon Structure for
CTAGE3P
ECgene alternative splicing isoforms for
CTAGE3P

Expression for CTAGE3P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CTAGE3P Gene

mRNA differential expression in normal tissues according to GTEx for CTAGE3P Gene

This gene is overexpressed in Testis (x27.6).

NURSA nuclear receptor signaling pathways regulating expression of CTAGE3P Gene:

CTAGE3P

SOURCE GeneReport for Unigene cluster for CTAGE3P Gene:

Hs.623891

mRNA Expression by UniProt/SwissProt for CTAGE3P Gene:

Q8IX95-CTGE3_HUMAN
Tissue specificity: Expressed in normal tissues including colon, mammary gland, ovary, placenta, stomach and testis, as well as several fetal tissues.
genes like me logo Genes that share expression patterns with CTAGE3P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CTAGE3P Gene

Orthologs for CTAGE3P Gene

Evolution for CTAGE3P Gene

ENSEMBL:
Gene Tree for CTAGE3P (if available)
TreeFam:
Gene Tree for CTAGE3P (if available)

No data available for Orthologs for CTAGE3P Gene

Paralogs for CTAGE3P Gene

(5) SIMAP similar genes for CTAGE3P Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with CTAGE3P: view

No data available for Paralogs for CTAGE3P Gene

Variants for CTAGE3P Gene

Additional Variant Information for CTAGE3P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CTAGE3P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CTAGE3P Gene

Disorders for CTAGE3P Gene

MalaCards: The human disease database

(1) MalaCards diseases for CTAGE3P Gene - From: GeneCards

Disorder Aliases PubMed IDs
cutaneous t cell lymphoma
  • cutaneous t-cell lymphoma
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for CTAGE3P

genes like me logo Genes that share disorders with CTAGE3P: view

No data available for UniProtKB/Swiss-Prot and Genatlas for CTAGE3P Gene

Publications for CTAGE3P Gene

  1. cTAGE: a cutaneous T cell lymphoma associated antigen family with tumor-specific splicing. (PMID: 12839582) Usener D … Eichmüller S (The Journal of investigative dermatology 2003) 2 3 4 58
  2. Serological detection of cutaneous T-cell lymphoma-associated antigens. (PMID: 11149944) Eichmuller S … Schadendorf D (Proceedings of the National Academy of Sciences of the United States of America 2001) 2 3 58

Products for CTAGE3P Gene

Sources for CTAGE3P Gene

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