Aliases for CTAGE12P Gene

Aliases for CTAGE12P Gene

  • CTAGE Family Member 12, Pseudogene 2 3 5
  • CTAGE Family, Member 12, Pseudogene 2
  • CTAGE12P 5

External Ids for CTAGE12P Gene

Summaries for CTAGE12P Gene

GeneCards Summary for CTAGE12P Gene

CTAGE12P (CTAGE Family Member 12, Pseudogene) is a Pseudogene.

Additional gene information for CTAGE12P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CTAGE12P Gene

Genomics for CTAGE12P Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for CTAGE12P Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J027625 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 -16.9 -16896 3.8 POLR2A JUND FOS HNF4A PKNOX1 LOC107987058 CTAGE12P C9orf72
GH09J027634 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 -23.6 -23607 2.4 RELB RUNX3 SPI1 POLR2A LOC107987058 CTAGE12P C9orf72
GH09J027614 Enhancer 0.4 Ensembl dbSUPER 0.4 -9.1 -9107 0.6 POLR2A CTAGE12P LOC107987058 C9orf72
GH09J027621 Enhancer 0.3 Ensembl dbSUPER 0.4 -12.0 -12006 2 CTAGE12P LOC107987058 C9orf72
GH09J027635 Enhancer 0.2 dbSUPER 0.3 -25.7 -25744 1.5 LOC107987058 CTAGE12P C9orf72
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CTAGE12P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for CTAGE12P Gene

Genomic Locations for CTAGE12P Gene
2,807 bases
Minus strand
2,980 bases
Minus strand

Genomic View for CTAGE12P Gene

Genes around CTAGE12P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CTAGE12P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CTAGE12P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CTAGE12P Gene

Proteins for CTAGE12P Gene

Post-translational modifications for CTAGE12P Gene

No Post-translational modifications

No data available for DME Specific Peptides for CTAGE12P Gene

Domains & Families for CTAGE12P Gene

Gene Families for CTAGE12P Gene

genes like me logo Genes that share domains with CTAGE12P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CTAGE12P Gene

Function for CTAGE12P Gene

Phenotypes From GWAS Catalog for CTAGE12P Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CTAGE12P Gene

Localization for CTAGE12P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CTAGE12P Gene

Pathways & Interactions for CTAGE12P Gene

PathCards logo

SuperPathways for CTAGE12P Gene

No Data Available

Gene Ontology (GO) - Biological Process for CTAGE12P Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CTAGE12P Gene

Drugs & Compounds for CTAGE12P Gene

No Compound Related Data Available

Transcripts for CTAGE12P Gene

mRNA/cDNA for CTAGE12P Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CTAGE12P Gene

No ASD Table

Relevant External Links for CTAGE12P Gene

GeneLoc Exon Structure for

Expression for CTAGE12P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CTAGE12P Gene

mRNA differential expression in normal tissues according to GTEx for CTAGE12P Gene

This gene is overexpressed in Brain - Cortex (x7.6) and Brain - Frontal Cortex (BA9) (x6.4).
genes like me logo Genes that share expression patterns with CTAGE12P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CTAGE12P Gene

Orthologs for CTAGE12P Gene

Evolution for CTAGE12P Gene

Gene Tree for CTAGE12P (if available)
Gene Tree for CTAGE12P (if available)

No data available for Orthologs for CTAGE12P Gene

Paralogs for CTAGE12P Gene

No data available for Paralogs for CTAGE12P Gene

Variants for CTAGE12P Gene

Additional Variant Information for CTAGE12P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CTAGE12P Gene

Disorders for CTAGE12P Gene

Additional Disease Information for CTAGE12P

No disorders were found for CTAGE12P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CTAGE12P Gene

Publications for CTAGE12P Gene

  1. Genome-wide association study identifies genetic determinants of urine PCA3 levels in men. (PMID: 23555189) Chen Z … Xu J (Neoplasia (New York, N.Y.) 2013) 3
  2. Genome-wide association with MRI atrophy measures as a quantitative trait locus for Alzheimer's disease. (PMID: 21116278) Furney SJ … AddNeuroMed Consortium (Molecular psychiatry 2011) 3

No data available for Mastermind for CTAGE12P Gene

Products for CTAGE12P Gene

Sources for CTAGE12P Gene