Aliases for CT70 Gene

Subcategory (RNA class) for CT70 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for CT70 Gene

  • Cancer/Testis Associated Transcript 70 2 3 5
  • Cancer/Testis Antigen 70 2 3
  • LeXis 2 3
  • CT70 2 5
  • NONHSAG053099.2 91
  • HSALNG0073424 164
  • Lnc-ABCA1-1 165

External Ids for CT70 Gene

Summaries for CT70 Gene

GeneCards Summary for CT70 Gene

CT70 (Cancer/Testis Associated Transcript 70) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with CT70 include Osteogenic Sarcoma.

Additional gene information for CT70 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CT70 Gene

Genomics for CT70 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for CT70 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CT70 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for CT70 Gene

Genomic Locations for CT70 Gene
chr9:104,970,426-104,991,865
(GRCh38/hg38)
Size:
21,440 bases
Orientation:
Minus strand
chr9:107,753,077-107,754,062
(GRCh37/hg19)
Size:
986 bases
Orientation:
Minus strand

Genomic View for CT70 Gene

Genes around CT70 on UCSC Golden Path with GeneCards custom track
CT70 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
CT70 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CT70 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CT70 Gene

Proteins for CT70 Gene

No data available for DME Specific Peptides for CT70 Gene

Domains & Families for CT70 Gene

Gene Families for CT70 Gene

genes like me logo Genes that share domains with CT70: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CT70 Gene

Function for CT70 Gene

Phenotypes From GWAS Catalog for CT70 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CT70 Gene

Localization for CT70 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CT70 Gene

Pathways & Interactions for CT70 Gene

PathCards logo

SuperPathways for CT70 Gene

No Data Available

Gene Ontology (GO) - Biological Process for CT70 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CT70 Gene

Drugs & Compounds for CT70 Gene

No Compound Related Data Available

Transcripts for CT70 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for CT70 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000EF24E8_9606 lncRNA 1731 2

HGNC: 37195,

Ensembl: ENST00000654661 (view in UCSC) ,

URS000044B209_9606 lncRNA 606 2

Ensembl: ENST00000457720 (view in UCSC) ,

LNCipedia: lnc-ABCA1-1:1,

URS0000EEB20A_9606 lncRNA 1290 1

Ensembl: ENST00000670487 (view in UCSC) ,

URS0000EECCF8_9606 lncRNA 1266 1

Ensembl: ENST00000659359 (view in UCSC) ,

URS0000EF5079_9606 lncRNA 923 1

Ensembl: ENST00000661986 (view in UCSC) ,

CT70 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for CT70 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for CT70 Gene

No ASD Table

Relevant External Links for CT70 Gene

GeneLoc Exon Structure for
CT70

Expression for CT70 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CT70 Gene

Orthologs for CT70 Gene

Evolution for CT70 Gene

ENSEMBL:
Gene Tree for CT70 (if available)
TreeFam:
Gene Tree for CT70 (if available)

No data available for Orthologs for CT70 Gene

Paralogs for CT70 Gene

No data available for Paralogs for CT70 Gene

Variants for CT70 Gene

Additional dbSNP identifiers (rs#s) for CT70 Gene

Additional Variant Information for CT70 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CT70

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CT70 Gene

Disorders for CT70 Gene

MalaCards: The human disease database

(1) MalaCards diseases for CT70 Gene - From: LncRNADisease

Disorder Aliases PubMed IDs
osteogenic sarcoma
  • osteosarcoma; osrc
- elite association - COSMIC cancer census association via MalaCards
Search CT70 in MalaCards View complete list of genes associated with diseases
genes like me logo Genes that share disorders with CT70: view

No data available for UniProtKB/Swiss-Prot and Genatlas for CT70 Gene

Publications for CT70 Gene

  1. Long noncoding RNA LeXis promotes osteosarcoma growth through upregulation of CTNNB1 expression. (PMID: 28744406) Wang G … Yang C (American journal of cancer research 2017) 2 3
  2. Feedback modulation of cholesterol metabolism by the lipid-responsive non-coding RNA LeXis. (PMID: 27251289) Sallam T … Tontonoz P (Nature 2016) 2 3
  3. Identification of cancer/testis-antigen genes by massively parallel signature sequencing. (PMID: 15905330) Chen YT … Simpson AJ (Proceedings of the National Academy of Sciences of the United States of America 2005) 2 3

No data available for Mastermind for CT70 Gene

Products for CT70 Gene

Sources for CT70 Gene