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Aliases for CT47A7 Gene

Aliases for CT47A7 Gene

  • Cancer/Testis Antigen Family 47, Member A7 2 3 5
  • Cancer/Testis CT47 Family, Member 7 2 3
  • CT47.7 3 4
  • CT47A1 CT47A2 CT47A3 CT47A4 CT47A5 CT47A6 CT47A7 CT47A8 CT47A9 CT47A10 CT47A11 CT47A12 4
  • Cancer/Testis Antigen 47A 3
  • Cancer/Testis Antigen 47 4
  • CT47.10 4
  • CT47.11 4
  • CT47.12 4
  • CT47.1 4
  • CT47.2 4
  • CT47.3 4
  • CT47.4 4
  • CT47.5 4
  • CT47.6 4
  • CT47.8 4
  • CT47.9 4
  • CT47 4

External Ids for CT47A7 Gene

Previous GeneCards Identifiers for CT47A7 Gene

  • GC0XM119917
  • GC0XM119922
  • GC0XM120087

Summaries for CT47A7 Gene

Entrez Gene Summary for CT47A7 Gene

  • This locus represents a member of the cancer/testis gene family 47. This family, also known as CT47, is comprised of 13 nearly identical loci clustered at Xq24. [provided by RefSeq, Sep 2010]

GeneCards Summary for CT47A7 Gene

CT47A7 (Cancer/Testis Antigen Family 47, Member A7) is a Protein Coding gene. An important paralog of this gene is CT47A6.

Additional gene information for CT47A7 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CT47A7 Gene

Genomics for CT47A7 Gene

GeneHancer (GH) Regulatory Elements for CT47A7 Gene

Promoters and enhancers for CT47A7 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI120956 Promoter 0.5 EPDnew 550.8 +0.0 5 0.1 CT47A7 ENSG00000271502 ENSG00000270397
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CT47A7 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the CT47A7 gene promoter:

Genomic Locations for CT47A7 Gene

Genomic Locations for CT47A7 Gene
3,319 bases
Minus strand

Genomic View for CT47A7 Gene

Genes around CT47A7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CT47A7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CT47A7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CT47A7 Gene

Proteins for CT47A7 Gene

  • Protein details for CT47A7 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Cancer/testis antigen 47A
    Protein Accession:
    Secondary Accessions:
    • Q8N747

    Protein attributes for CT47A7 Gene

    288 amino acids
    Molecular mass:
    30100 Da
    Quaternary structure:
    No Data Available

neXtProt entry for CT47A7 Gene

Post-translational modifications for CT47A7 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for CT47A7 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for CT47A7 Gene

Domains & Families for CT47A7 Gene

Gene Families for CT47A7 Gene

Human Protein Atlas (HPA):
  • Predicted intracellular proteins

Protein Domains for CT47A7 Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CT47A7: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CT47A7 Gene

Function for CT47A7 Gene

Phenotypes for CT47A7 Gene

GenomeRNAi human phenotypes for CT47A7:
genes like me logo Genes that share phenotypes with CT47A7: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CT47A7 Gene

Localization for CT47A7 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CT47A7 Gene

Pathways & Interactions for CT47A7 Gene

SuperPathways for CT47A7 Gene

No Data Available

Interacting Proteins for CT47A7 Gene

Gene Ontology (GO) - Biological Process for CT47A7 Gene


No data available for Pathways by source and SIGNOR curated interactions for CT47A7 Gene

Drugs & Compounds for CT47A7 Gene

No Compound Related Data Available

Transcripts for CT47A7 Gene

mRNA/cDNA for CT47A7 Gene

(2) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Inhibitory RNA Products

Alternative Splicing Database (ASD) splice patterns (SP) for CT47A7 Gene

No ASD Table

Relevant External Links for CT47A7 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for CT47A7 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CT47A7 Gene

Protein differential expression in normal tissues from HIPED for CT47A7 Gene

This gene is overexpressed in Ovary (27.3), Bone (19.6), and Testis (16.4).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MaxQB, and MOPED for CT47A7 Gene

Protein tissue co-expression partners for CT47A7 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of CT47A7 Gene:


SOURCE GeneReport for Unigene cluster for CT47A7 Gene:


mRNA Expression by UniProt/SwissProt for CT47A7 Gene:

Tissue specificity: Strongly expressed in testis, low expression in placenta, and very low expression in brain.
genes like me logo Genes that share expression patterns with CT47A7: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CT47A7 Gene

Orthologs for CT47A7 Gene

This gene was present in the common ancestor of mammals.

Orthologs for CT47A7 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia -- 34
  • 95 (a)
(Canis familiaris)
Mammalia -- 34
  • 24 (a)
Species where no ortholog for CT47A7 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for CT47A7 Gene

Gene Tree for CT47A7 (if available)
Gene Tree for CT47A7 (if available)

Paralogs for CT47A7 Gene

(1) SIMAP similar genes for CT47A7 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with CT47A7: view

Variants for CT47A7 Gene

Sequence variations from dbSNP and Humsavar for CT47A7 Gene

SNP ID Clin Chr 0X pos Variation AA Info Type
rs1000739377 -- 120,956,505(-) G/C 5_prime_UTR_variant
rs1054036167 -- 120,956,611(-) C/A upstream_transcript_variant
rs113333046 -- 120,955,404(-) G/A intron_variant
rs202102616 -- 120,952,970(-) AAAAAAAAAAAAAAAAA/AAAAAAAAAAAAAAAA downstream_transcript_variant
rs41301497 -- 120,954,799(-) C/T 3_prime_UTR_variant, intron_variant

Structural Variations from Database of Genomic Variants (DGV) for CT47A7 Gene

Variant ID Type Subtype PubMed ID
esv27639 CNV gain+loss 19812545
esv3574471 CNV loss 25503493
esv3577211 CNV gain 25503493
esv3577212 CNV gain 25503493
nsv510856 CNV deletion 20534489
nsv515167 CNV gain 21397061
nsv7061 CNV deletion 18451855
nsv820952 CNV deletion 20802225
nsv9972 CNV gain+loss 18304495

Additional Variant Information for CT47A7 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for CT47A7 Gene

Disorders for CT47A7 Gene

Additional Disease Information for CT47A7

No disorders were found for CT47A7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CT47A7 Gene

Publications for CT47A7 Gene

  1. Identification of a new cancer/testis gene family, CT47, among expressed multicopy genes on the human X chromosome. (PMID: 16382448) Chen YT … Jongeneel CV (Genes, chromosomes & cancer 2006) 2 3 4 58
  2. The DNA sequence of the human X chromosome. (PMID: 15772651) Ross MT … Bentley DR (Nature 2005) 4 58
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 4 58

Products for CT47A7 Gene

Sources for CT47A7 Gene

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