Aliases for CT47A5 Gene

Aliases for CT47A5 Gene

  • Cancer/Testis Antigen Family 47 Member A5 2 3 5
  • Cancer/Testis CT47 Family, Member 5 2 3
  • Cancer/Testis Antigen 47 3 4
  • CT47.5 3 4
  • CT47 3 4
  • Cancer/Testis Antigen 47A 3
  • CT47.10 4
  • CT47.11 4
  • CT47.12 4
  • CT47.1 4
  • CT47.2 4
  • CT47.3 4
  • CT47.4 4
  • CT47.6 4
  • CT47.7 4
  • CT47.8 4
  • CT47.9 4

External Ids for CT47A5 Gene

Previous GeneCards Identifiers for CT47A5 Gene

  • GC0XM119926
  • GC0XM120093

Summaries for CT47A5 Gene

GeneCards Summary for CT47A5 Gene

CT47A5 (Cancer/Testis Antigen Family 47 Member A5) is a Protein Coding gene. Diseases associated with CT47A5 include Ceruminoma and Granular Cell Carcinoma. An important paralog of this gene is CT47A2.

Additional gene information for CT47A5 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CT47A5 Gene

Genomics for CT47A5 Gene

GeneHancer (GH) Regulatory Elements for CT47A5 Gene

Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for CT47A5

Top Transcription factor binding sites by QIAGEN in the CT47A5 gene promoter:
  • POU2F1
  • POU2F1a

Genomic Locations for CT47A5 Gene

Genomic Locations for CT47A5 Gene
3,359 bases
Minus strand
8,180 bases
Minus strand

Genomic View for CT47A5 Gene

Genes around CT47A5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CT47A5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CT47A5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CT47A5 Gene

Proteins for CT47A5 Gene

  • Protein details for CT47A5 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Cancer/testis antigen 47A
    Protein Accession:
    Secondary Accessions:
    • Q8N747

    Protein attributes for CT47A5 Gene

    288 amino acids
    Molecular mass:
    30100 Da
    Quaternary structure:
    No Data Available

neXtProt entry for CT47A5 Gene

Post-translational modifications for CT47A5 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for CT47A5 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for CT47A5 Gene

Domains & Families for CT47A5 Gene

Gene Families for CT47A5 Gene

Human Protein Atlas (HPA):
  • Predicted intracellular proteins

Protein Domains for CT47A5 Gene

genes like me logo Genes that share domains with CT47A5: view

No data available for Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CT47A5 Gene

Function for CT47A5 Gene

Phenotypes for CT47A5 Gene

GenomeRNAi human phenotypes for CT47A5:
genes like me logo Genes that share phenotypes with CT47A5: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CT47A5 Gene

Localization for CT47A5 Gene

Subcellular locations from

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for CT47A5 gene
Compartment Confidence
nucleus 1
cytosol 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CT47A5 Gene

Pathways & Interactions for CT47A5 Gene

PathCards logo

SuperPathways for CT47A5 Gene

No Data Available

Interacting Proteins for CT47A5 Gene


Gene Ontology (GO) - Biological Process for CT47A5 Gene


No data available for Pathways by source and SIGNOR curated interactions for CT47A5 Gene

Drugs & Compounds for CT47A5 Gene

No Compound Related Data Available

Transcripts for CT47A5 Gene

mRNA/cDNA for CT47A5 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CT47A5 Gene

No ASD Table

Relevant External Links for CT47A5 Gene

GeneLoc Exon Structure for

Expression for CT47A5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CT47A5 Gene

Protein differential expression in normal tissues from HIPED for CT47A5 Gene

This gene is overexpressed in Ovary (27.3), Bone (19.6), and Testis (16.4).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MaxQB, and MOPED for CT47A5 Gene

Protein tissue co-expression partners for CT47A5 Gene

- Elite partner

mRNA Expression by UniProt/SwissProt for CT47A5 Gene:

Tissue specificity: Strongly expressed in testis, low expression in placenta, and very low expression in brain.
genes like me logo Genes that share expression patterns with CT47A5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CT47A5 Gene

Orthologs for CT47A5 Gene

This gene was present in the common ancestor of mammals.

Orthologs for CT47A5 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia -- 31
  • 95 (a)
(Canis familiaris)
Mammalia -- 31
  • 24 (a)
Species where no ortholog for CT47A5 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for CT47A5 Gene

Gene Tree for CT47A5 (if available)
Gene Tree for CT47A5 (if available)

Paralogs for CT47A5 Gene

(1) SIMAP similar genes for CT47A5 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with CT47A5: view

Variants for CT47A5 Gene

Additional dbSNP identifiers (rs#s) for CT47A5 Gene

Structural Variations from Database of Genomic Variants (DGV) for CT47A5 Gene

Variant ID Type Subtype PubMed ID
dgv2405e212 CNV loss 25503493
dgv2406e212 CNV gain 25503493
dgv2407e212 CNV loss 25503493
dgv2408e212 CNV gain 25503493
dgv2409e212 CNV gain 25503493
dgv2410e212 CNV loss 25503493
esv27639 CNV gain+loss 19812545
esv3577211 CNV gain 25503493
nsv510856 CNV deletion 20534489
nsv515167 CNV gain 21397061
nsv7061 CNV deletion 18451855
nsv820952 CNV deletion 20802225
nsv9972 CNV gain+loss 18304495

Additional Variant Information for CT47A5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for CT47A5 Gene

Disorders for CT47A5 Gene

MalaCards: The human disease database

(4) MalaCards diseases for CT47A5 Gene - From: DISEASES

Disorder Aliases PubMed IDs
  • ceruminous adenoma
granular cell carcinoma
  • granular cell adenocarcinoma
retinitis pigmentosa 6
  • rp6
facioscapulohumeral muscular dystrophy 1
  • fmd
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for CT47A5

genes like me logo Genes that share disorders with CT47A5: view

No data available for UniProtKB/Swiss-Prot and Genatlas for CT47A5 Gene

Publications for CT47A5 Gene

  1. Identification of a new cancer/testis gene family, CT47, among expressed multicopy genes on the human X chromosome. (PMID: 16382448) Chen YT … Jongeneel CV (Genes, chromosomes & cancer 2006) 2 3 4 54
  2. A Genome-Wide CRISPR Screen Identifies Genes Critical for Resistance to FLT3 Inhibitor AC220. (PMID: 28625976) Hou P … Huang J (Cancer research 2017) 3 54
  3. The DNA sequence of the human X chromosome. (PMID: 15772651) Ross MT … Bentley DR (Nature 2005) 4 54
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 4 54

Products for CT47A5 Gene

Sources for CT47A5 Gene