Aliases for CSGALNACT2-DT Gene

Data sources for CSGALNACT2-DT Gene:

Subcategory (RNA class) for CSGALNACT2-DT Gene

lncRNA

Aliases for CSGALNACT2-DT Gene

External Ids for CSGALNACT2-DT Gene

Summaries for CSGALNACT2-DT Gene

GeneCards Summary for CSGALNACT2-DT Gene

CSGALNACT2-DT (CSGALNACT2 Divergent Transcript) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for CSGALNACT2-DT Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CSGALNACT2-DT Gene

Genomics for CSGALNACT2-DT Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for CSGALNACT2-DT Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CSGALNACT2-DT on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for CSGALNACT2-DT Gene

Latest Assembly
chr10:43,131,888-43,138,400
(GRCh38/hg38)
Size:
6,513 bases
Orientation:
Minus strand

Previous Assembly
chr10:43,632,272-43,633,782
(GRCh37/hg19 by Ensembl)
Size:
1,511 bases
Orientation:
Minus strand

Genomic View for CSGALNACT2-DT Gene

Genes around CSGALNACT2-DT on UCSC Golden Path with GeneCards custom track
CSGALNACT2-DT in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
CSGALNACT2-DT Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CSGALNACT2-DT Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for CSGALNACT2-DT Gene

Proteins for CSGALNACT2-DT Gene

Post-translational modifications for CSGALNACT2-DT Gene

No Post-translational modifications

No data available for DME Specific Peptides for CSGALNACT2-DT Gene

Domains & Families for CSGALNACT2-DT Gene

Gene Families for CSGALNACT2-DT Gene

genes like me logo Genes that share domains with CSGALNACT2-DT: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CSGALNACT2-DT Gene

Function for CSGALNACT2-DT Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CSGALNACT2-DT Gene

Localization for CSGALNACT2-DT Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CSGALNACT2-DT Gene

Pathways & Interactions for CSGALNACT2-DT Gene

PathCards logo

SuperPathways for CSGALNACT2-DT Gene

No Data Available

Gene Ontology (GO) - Biological Process for CSGALNACT2-DT Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CSGALNACT2-DT Gene

Drugs & Compounds for CSGALNACT2-DT Gene

No Compound Related Data Available

Transcripts for CSGALNACT2-DT Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for CSGALNACT2-DT Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000031602_9606 lncRNA 1512 2

Ensembl: ENST00000609407 (view in UCSC) ,

LNCipedia: lnc-RASGEF1A-2:1,

URS0000D5E006_9606 lncRNA 1554 1

LNCipedia: lnc-RASGEF1A-2:5,

URS0000D583A6_9606 lncRNA 1473 1

LNCipedia: lnc-RASGEF1A-2:6,

URS0001BD0A66_9606 lncRNA 1470 1

LncBook: HSALNT0161812,

URS0000D5DF0A_9606 lncRNA 1468 1

LNCipedia: lnc-RASGEF1A-2:3,

CSGALNACT2-DT in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for CSGALNACT2-DT Gene

No ASD Table

Relevant External Links for CSGALNACT2-DT Gene

GeneLoc Exon Structure for
CSGALNACT2-DT

No data available for mRNA/cDNA for CSGALNACT2-DT Gene

Expression for CSGALNACT2-DT Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CSGALNACT2-DT Gene

Orthologs for CSGALNACT2-DT Gene

Evolution for CSGALNACT2-DT Gene

ENSEMBL:
Gene Tree for CSGALNACT2-DT (if available)
TreeFam:
Gene Tree for CSGALNACT2-DT (if available)

No data available for Orthologs for CSGALNACT2-DT Gene

Paralogs for CSGALNACT2-DT Gene

No data available for Paralogs for CSGALNACT2-DT Gene

Variants for CSGALNACT2-DT Gene

Additional Variant Information for CSGALNACT2-DT Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CSGALNACT2-DT

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CSGALNACT2-DT Gene

Disorders for CSGALNACT2-DT Gene

No disorders were found for CSGALNACT2-DT Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CSGALNACT2-DT Gene

Publications for CSGALNACT2-DT Gene

No publications were found for CSGALNACT2-DT Gene.

No data available for Mastermind for CSGALNACT2-DT Gene

Products for CSGALNACT2-DT Gene

Sources for CSGALNACT2-DT Gene