Aliases for CRYZL2P Gene

Aliases for CRYZL2P Gene

  • Crystallin Zeta Like 2, Pseudogene 2 3 5
  • Quinone Oxidoreductase-Like Protein 2 Pseudogene 3
  • CRYZL2P 5

External Ids for CRYZL2P Gene

Summaries for CRYZL2P Gene

GeneCards Summary for CRYZL2P Gene

CRYZL2P (Crystallin Zeta Like 2, Pseudogene) is a Pseudogene.

Additional gene information for CRYZL2P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CRYZL2P Gene

Genomics for CRYZL2P Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for CRYZL2P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J178037 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE CraniofacialAtlas 611.7 0.0 -29 1.9 HNRNPL GATAD2A CTCF ZNF512 NFKBIZ KDM1A RBFOX2 RXRB REST IRF2 CRYZL2P CRYZL2P-SEC16B SEC16B piR-30188-011 RASAL2
GH01J178010 Enhancer 0.8 Ensembl ENCODE 19.5 +26.6 26606 2.4 CEBPG PKNOX1 POLR2A PBX2 CEBPA CEBPB JUN FOS JUND FOSL1 CRYZL2P lnc-RASAL2-3 ENSG00000276563 SEC16B CRYZL2P-SEC16B
GH01J178031 Enhancer 1 Ensembl ENCODE 12.2 +5.2 5234 2.1 GATAD2A CTCF ZNF512 FOXA1 RXRB REST RAD21 IRF2 SP1 ZNF501 CRYZL2P CRYZL2P-SEC16B ENSG00000276563 lnc-RASAL2-3 SEC16B
GH01J177968 Promoter/Enhancer 1.5 EPDnew Ensembl ENCODE 7.8 +68.3 68327 3.1 GATAD2A REST TFE3 RCOR2 GABPA RXRB IRF2 SP1 CEBPA KMT2B SEC16B CRYZL2P lnc-SEC16B-2 CRYZL2P-SEC16B BRINP2
GH01J178020 Enhancer 0.8 ENCODE 13.4 +15.7 15675 2.7 GATAD2A RCOR2 RXRB SP1 CEBPA SCRT2 SOX13 CEBPB ARID3A RELA CRYZL2P ENSG00000276563 CRYZL2P-SEC16B lnc-RASAL2-3 SEC16B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CRYZL2P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for CRYZL2P Gene

Genomic Locations for CRYZL2P Gene
chr1:178,006,136-178,038,007
(GRCh38/hg38)
Size:
31,872 bases
Orientation:
Minus strand
chr1:177,975,271-178,007,142
(GRCh37/hg19)
Size:
31,872 bases
Orientation:
Minus strand

Genomic View for CRYZL2P Gene

Genes around CRYZL2P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CRYZL2P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CRYZL2P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CRYZL2P Gene

Proteins for CRYZL2P Gene

Post-translational modifications for CRYZL2P Gene

No Post-translational modifications

No data available for DME Specific Peptides for CRYZL2P Gene

Domains & Families for CRYZL2P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CRYZL2P Gene

Function for CRYZL2P Gene

Phenotypes From GWAS Catalog for CRYZL2P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CRYZL2P Gene

Localization for CRYZL2P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CRYZL2P Gene

Pathways & Interactions for CRYZL2P Gene

PathCards logo

SuperPathways for CRYZL2P Gene

No Data Available

Gene Ontology (GO) - Biological Process for CRYZL2P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CRYZL2P Gene

Drugs & Compounds for CRYZL2P Gene

No Compound Related Data Available

Transcripts for CRYZL2P Gene

mRNA/cDNA for CRYZL2P Gene

4 NCBI additional mRNA sequence :
4 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CRYZL2P Gene

No ASD Table

Relevant External Links for CRYZL2P Gene

GeneLoc Exon Structure for
CRYZL2P

Expression for CRYZL2P Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for CRYZL2P

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CRYZL2P Gene

Orthologs for CRYZL2P Gene

Evolution for CRYZL2P Gene

ENSEMBL:
Gene Tree for CRYZL2P (if available)
TreeFam:
Gene Tree for CRYZL2P (if available)

No data available for Orthologs for CRYZL2P Gene

Paralogs for CRYZL2P Gene

No data available for Paralogs for CRYZL2P Gene

Variants for CRYZL2P Gene

Structural Variations from Database of Genomic Variants (DGV) for CRYZL2P Gene

Variant ID Type Subtype PubMed ID
esv3409640 CNV insertion 20981092
nsv523131 CNV loss 19592680
nsv548252 CNV gain 21841781

Additional Variant Information for CRYZL2P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CRYZL2P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) and Variation tolerance for CRYZL2P Gene

Disorders for CRYZL2P Gene

Additional Disease Information for CRYZL2P

No disorders were found for CRYZL2P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CRYZL2P Gene

Publications for CRYZL2P Gene

  1. p53-inducible long non-coding RNA PICART1 mediates cancer cell proliferation and migration. (PMID: 28339031) Cao Y … Cao D (International journal of oncology 2017) 3
  2. Identification and analysis of unitary pseudogenes: historic and contemporary gene losses in humans and other primates. (PMID: 20210993) Zhang ZD … Gerstein M (Genome biology 2010) 3
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3
  5. Prediction of the coding sequences of unidentified human genes. XXI. The complete sequences of 60 new cDNA clones from brain which code for large proteins. (PMID: 11572484) Nagase T … Ohara O (DNA research : an international journal for rapid publication of reports on genes and genomes 2001) 3

No data available for Mastermind for CRYZL2P Gene

Products for CRYZL2P Gene

Sources for CRYZL2P Gene