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Aliases for CRYGEP Gene

Aliases for CRYGEP Gene

  • Crystallin Gamma E, Pseudogene 2 3 5
  • Crystallin, Gamma E Pseudogene 1 2 3
  • Crystallin, Gamma E, Pseudogene 2
  • Crystallin, Gamma D Pseudogene 3
  • D2S1472 3
  • CRYGEP1 3
  • CRYG5 3
  • CCL 3
  • G2 3

External Ids for CRYGEP Gene

Previous HGNC Symbols for CRYGEP Gene

  • CRYG5
  • CCL
  • CRYGEP1

Previous GeneCards Identifiers for CRYGEP Gene

  • GC02M208680
  • GC02M208973

Summaries for CRYGEP Gene

GeneCards Summary for CRYGEP Gene

CRYGEP (Crystallin Gamma E, Pseudogene) is a Pseudogene.

Additional gene information for CRYGEP Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CRYGEP Gene

Genomics for CRYGEP Gene

GeneHancer (GH) Regulatory Elements for CRYGEP Gene

Promoters and enhancers for CRYGEP Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J208112 Enhancer 1 Ensembl ENCODE 663.6 -0.3 -315 1.7 MZF1 FEZF1 ZNF2 RFX5 ZNF213 ZNF366 RCOR1 OVOL3 REST ZNF843 CRYGEP CRYGB IDH1-AS1 IDH1 CRYGA FZD5 CRYGD GC02P208116
GH02J208129 Promoter/Enhancer 1.3 EPDnew ENCODE 7.9 -17.8 -17828 1.1 ELF3 MLX ARID4B THRB ZNF48 ZSCAN9 RARA SLC30A9 ZNF614 RCOR1 CRYGC CRYGA IDH1-AS1 IDH1 CRYGEP CRYGD LOC100533727 GC02P208116 LOC100507443
GH02J208135 Enhancer 0.8 ENCODE 11.5 -23.3 -23332 1.6 ELF3 MLX ZNF48 ZSCAN9 RARA ZNF614 CREM THAP11 MIXL1 RXRA LOC100533727 CRYGA CRYGEP IDH1-AS1 IDH1 CRYGC CRYGD LOC100507443 GC02P208116
GH02J208123 Promoter/Enhancer 0.9 EPDnew Ensembl 7.9 -11.6 -11615 0.7 L3MBTL2 ZBTB33 ZFX CRYGD CRYGEP GC02P208116 LOC100507443
GH02J208142 Enhancer 0.8 ENCODE 5.5 -30.6 -30619 1.3 PKNOX1 FOXA2 ARID4B ZNF48 RARA THAP11 HMG20B CEBPB MIER2 ZNF843 CRYGEP CRYGB CRYGC LOC100507443 GC02P208116
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CRYGEP on UCSC Golden Path with GeneCards custom track

Genomic Locations for CRYGEP Gene

Genomic Locations for CRYGEP Gene
chr2:208,108,164-208,112,717
(GRCh38/hg38)
Size:
4,554 bases
Orientation:
Minus strand
chr2:208,972,888-208,977,441
(GRCh37/hg19)

Genomic View for CRYGEP Gene

Genes around CRYGEP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CRYGEP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CRYGEP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CRYGEP Gene

Proteins for CRYGEP Gene

Post-translational modifications for CRYGEP Gene

No Post-translational modifications

No data available for DME Specific Peptides for CRYGEP Gene

Domains & Families for CRYGEP Gene

Gene Families for CRYGEP Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CRYGEP: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CRYGEP Gene

Function for CRYGEP Gene

Animal Model Products

miRNA for CRYGEP Gene

miRTarBase miRNAs that target CRYGEP

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for CRYGEP Gene

Localization for CRYGEP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CRYGEP Gene

Pathways & Interactions for CRYGEP Gene

SuperPathways for CRYGEP Gene

No Data Available

Interacting Proteins for CRYGEP Gene

Gene Ontology (GO) - Biological Process for CRYGEP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CRYGEP Gene

Drugs & Compounds for CRYGEP Gene

No Compound Related Data Available

Transcripts for CRYGEP Gene

mRNA/cDNA for CRYGEP Gene

(7) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CRYGEP Gene

No ASD Table

Relevant External Links for CRYGEP Gene

GeneLoc Exon Structure for
CRYGEP
ECgene alternative splicing isoforms for
CRYGEP

Expression for CRYGEP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CRYGEP Gene

mRNA differential expression in normal tissues according to GTEx for CRYGEP Gene

This gene is overexpressed in Ovary (x7.8), Brain - Anterior cingulate cortex (BA24) (x6.2), Brain - Amygdala (x6.0), Brain - Substantia nigra (x5.6), Brain - Hypothalamus (x5.1), Brain - Cortex (x4.7), and Brain - Hippocampus (x4.5).

NURSA nuclear receptor signaling pathways regulating expression of CRYGEP Gene:

CRYGEP
genes like me logo Genes that share expression patterns with CRYGEP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CRYGEP Gene

Orthologs for CRYGEP Gene

Evolution for CRYGEP Gene

ENSEMBL:
Gene Tree for CRYGEP (if available)
TreeFam:
Gene Tree for CRYGEP (if available)

No data available for Orthologs for CRYGEP Gene

Paralogs for CRYGEP Gene

No data available for Paralogs for CRYGEP Gene

Variants for CRYGEP Gene

Additional Variant Information for CRYGEP Gene

Human Gene Mutation Database (HGMD)
CRYGEP
SNPedia medical, phenotypic, and genealogical associations of SNPs for
CRYGEP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CRYGEP Gene

Disorders for CRYGEP Gene

No disorders were found for CRYGEP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CRYGEP Gene

Publications for CRYGEP Gene

  1. Activation of the gamma E-crystallin pseudogene in the human hereditary Coppock-like cataract. (PMID: 8004095) Brakenhoff RH … Schoenmakers JG (Human molecular genetics 1994) 2 3 58
  2. Conversion and compensatory evolution of the gamma-crystallin genes and identification of a cataractogenic mutation that reverses the sequence of the human CRYGD gene to an ancestral state. (PMID: 17564961) Plotnikova OV … Rogaev EI (American journal of human genetics 2007) 22 58
  3. Toward a complete human genome sequence. (PMID: 9847074) Sanger Center … Genome Sequencing Center (Genome research 1998) 3 58
  4. Gamma-crystallins of the human eye lens: expression analysis of five members of the gene family. (PMID: 3670288) Meakin SO … Breitman ML (Molecular and cellular biology 1987) 3 58
  5. Structural and evolutionary relationships among five members of the human gamma-crystallin gene family. (PMID: 4033658) Meakin SO … Tsui LC (Molecular and cellular biology 1985) 3 58

Products for CRYGEP Gene

Sources for CRYGEP Gene

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