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Aliases for CRSP8P Gene

Aliases for CRSP8P Gene

  • Mediator Complex Subunit 27 Pseudogene 3
  • AC026410.3 5

External Ids for CRSP8P Gene

Previous GeneCards Identifiers for CRSP8P Gene

  • GC05M079647

Summaries for CRSP8P Gene

GeneCards Summary for CRSP8P Gene

CRSP8P (Mediator Complex Subunit 27 Pseudogene) is a Pseudogene.

Additional gene information for CRSP8P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CRSP8P Gene

Genomics for CRSP8P Gene

GeneHancer (GH) Regulatory Elements for CRSP8P Gene

Promoters and enhancers for CRSP8P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I080351 Promoter 0.6 Ensembl 550.8 +0.2 165 0.4 ZBTB33 CRSP8P MSH3 RBMX2P5
GH05I079611 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 11.4 +739.1 739055 3.5 CLOCK FEZF1 DMAP1 YY1 ZNF213 E2F8 SP3 ZFP41 MEF2D ZNF610 PAPD4 RPS3AP20 MTX3 CRSP8P GC05M079620
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CRSP8P on UCSC Golden Path with GeneCards custom track

Genomic Locations for CRSP8P Gene

Genomic Locations for CRSP8P Gene
chr5:80,350,605-80,351,966
(GRCh38/hg38)
Size:
1,362 bases
Orientation:
Minus strand
chr5:79,646,424-79,647,785
(GRCh37/hg19)

Genomic View for CRSP8P Gene

Genes around CRSP8P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CRSP8P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CRSP8P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CRSP8P Gene

Proteins for CRSP8P Gene

Post-translational modifications for CRSP8P Gene

No Post-translational modifications

No data available for DME Specific Peptides for CRSP8P Gene

Domains & Families for CRSP8P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CRSP8P Gene

Function for CRSP8P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CRSP8P Gene

Localization for CRSP8P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CRSP8P Gene

Pathways & Interactions for CRSP8P Gene

SuperPathways for CRSP8P Gene

No Data Available

Interacting Proteins for CRSP8P Gene

Gene Ontology (GO) - Biological Process for CRSP8P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CRSP8P Gene

Drugs & Compounds for CRSP8P Gene

No Compound Related Data Available

Transcripts for CRSP8P Gene

mRNA/cDNA for CRSP8P Gene

(3) Additional mRNA sequences :
(20) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for CRSP8P Gene

Mediator complex subunit 27 pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for CRSP8P Gene

No ASD Table

Relevant External Links for CRSP8P Gene

GeneLoc Exon Structure for
CRSP8P

Expression for CRSP8P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CRSP8P Gene

SOURCE GeneReport for Unigene cluster for CRSP8P Gene:

Hs.568291
genes like me logo Genes that share expression patterns with CRSP8P: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CRSP8P Gene

Orthologs for CRSP8P Gene

Evolution for CRSP8P Gene

ENSEMBL:
Gene Tree for CRSP8P (if available)
TreeFam:
Gene Tree for CRSP8P (if available)

No data available for Orthologs for CRSP8P Gene

Paralogs for CRSP8P Gene

No data available for Paralogs for CRSP8P Gene

Variants for CRSP8P Gene

Sequence variations from dbSNP and Humsavar for CRSP8P Gene

SNP ID Clin Chr 05 pos Variation AA Info Type
rs1000645414 -- 80,351,697(-) T/C non_coding_transcript_variant
rs1000665683 -- 80,353,427(-) T/C upstream_transcript_variant
rs1000714594 -- 80,353,228(-) A/T upstream_transcript_variant
rs1001614900 -- 80,350,718(-) G/A non_coding_transcript_variant
rs1001647501 -- 80,350,398(-) G/A downstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for CRSP8P Gene

Variant ID Type Subtype PubMed ID
nsv518480 CNV gain 19592680
dgv1108e214 CNV gain 21293372

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for CRSP8P Gene

Disorders for CRSP8P Gene

Additional Disease Information for CRSP8P

No disorders were found for CRSP8P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CRSP8P Gene

Publications for CRSP8P Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for CRSP8P Gene

Sources for CRSP8P Gene

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