Aliases for CRPP1 Gene

Aliases for CRPP1 Gene

  • C-Reactive Protein Pseudogene 1 2 3 5
  • C-Reactive Protein, Pentraxin-Related Pseudogene 3
  • CRPP1 5

External Ids for CRPP1 Gene

Previous GeneCards Identifiers for CRPP1 Gene

  • GC01U990029
  • GC01M156488
  • GC01M157941

Summaries for CRPP1 Gene

GeneCards Summary for CRPP1 Gene

CRPP1 (C-Reactive Protein Pseudogene 1) is a Pseudogene.

Additional gene information for CRPP1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for CRPP1 Gene

Genomics for CRPP1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for CRPP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J159705 Enhancer 0.6 Ensembl 600.7 +0.0 6 0.4 SP1 FOXA2 YY1 GABPA ZBTB33 JUND NR2F2 RAD21 HNF4A RXRA CRPP1 lnc-CRP-1 CRP ENSG00000276632 APCS
GH01J159706 Enhancer 0.5 Ensembl 600.7 -0.5 -494 0.2 SP1 GABPA ZBTB33 RXRA HNF4A YY1 ATF3 CRPP1 lnc-CRP-1 CRP piR-47214 APCS
GH01J159700 Enhancer 0.3 Ensembl 0.4 +5.2 5206 0.4 CTCF CRPP1 lnc-CRP-1 CRP ENSG00000276632 APCS
GH01J159663 Enhancer 0.3 Ensembl 0.3 +41.5 41506 2.2 SPI1 ZNF558 ENSG00000276632 lnc-CRP-1 CRPP1 CRP APCS
GH01J159682 Enhancer 0.2 FANTOM5 0.4 +22.7 22668 0.2 FCER1A CRP OR10J5 OR10J1 lnc-CRP-1 CRPP1 ENSG00000276632 APCS
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CRPP1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for CRPP1 Gene

Genomic Locations for CRPP1 Gene
chr1:159,704,950-159,705,607
(GRCh38/hg38)
Size:
658 bases
Orientation:
Minus strand
chr1:159,674,740-159,675,397
(GRCh37/hg19)
Size:
658 bases
Orientation:
Minus strand

Genomic View for CRPP1 Gene

Genes around CRPP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CRPP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CRPP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CRPP1 Gene

Proteins for CRPP1 Gene

No data available for DME Specific Peptides for CRPP1 Gene

Domains & Families for CRPP1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for CRPP1 Gene

Function for CRPP1 Gene

Molecular function for CRPP1 Gene

GENATLAS Biochemistry:
C-reactive protein,pseudogene 1,pentaxin (pentraxin) family

Phenotypes From GWAS Catalog for CRPP1 Gene

Animal Model Products

CRISPR Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CRPP1 Gene

Localization for CRPP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CRPP1 Gene

Pathways & Interactions for CRPP1 Gene

PathCards logo

SuperPathways for CRPP1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for CRPP1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for CRPP1 Gene

Drugs & Compounds for CRPP1 Gene

No Compound Related Data Available

Transcripts for CRPP1 Gene

mRNA/cDNA for CRPP1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for CRPP1 Gene

No ASD Table

Relevant External Links for CRPP1 Gene

GeneLoc Exon Structure for
CRPP1

Expression for CRPP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for CRPP1 Gene

mRNA differential expression in normal tissues according to GTEx for CRPP1 Gene

This gene is overexpressed in Liver (x52.4).
genes like me logo Genes that share expression patterns with CRPP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CRPP1 Gene

Orthologs for CRPP1 Gene

Evolution for CRPP1 Gene

ENSEMBL:
Gene Tree for CRPP1 (if available)
TreeFam:
Gene Tree for CRPP1 (if available)

No data available for Orthologs for CRPP1 Gene

Paralogs for CRPP1 Gene

No data available for Paralogs for CRPP1 Gene

Variants for CRPP1 Gene

Additional Variant Information for CRPP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CRPP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CRPP1 Gene

Disorders for CRPP1 Gene

Additional Disease Information for CRPP1

Genetic Association Database
(GAD)

No disorders were found for CRPP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CRPP1 Gene

Publications for CRPP1 Gene

  1. Genome-wide association with C-reactive protein levels in CLHNS: evidence for the CRP and HNF1A loci and their interaction with exposure to a pathogenic environment. (PMID: 21647738) Wu Y … Lange LA (Inflammation 2012) 3 41
  2. C-reactive protein (CRP) promoter polymorphisms influence circulating CRP levels in a genome-wide association study of African Americans. (PMID: 22492993) Doumatey AP … Rotimi CN (Human molecular genetics 2012) 3
  3. Meta-analysis of genome-wide association studies in >80 000 subjects identifies multiple loci for C-reactive protein levels. (PMID: 21300955) Dehghan A … Chasman DI (Circulation 2011) 41
  4. Genome-wide association analysis of metabolic traits in a birth cohort from a founder population. (PMID: 19060910) Sabatti C … Peltonen L (Nature genetics 2009) 41
  5. Genome-wide association scan of tag SNPs identifies a susceptibility locus for lung cancer at 15q25.1. (PMID: 18385676) Amos CI … Houlston RS (Nature genetics 2008) 41

Products for CRPP1 Gene

Sources for CRPP1 Gene