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Aliases for CROCCP4 Gene

Aliases for CROCCP4 Gene

  • Ciliary Rootlet Coiled-Coil, Rootletin Pseudogene 4 2 3 5

External Ids for CROCCP4 Gene

Previous GeneCards Identifiers for CROCCP4 Gene

  • GC01P017079
  • GC01P017081
  • GC01P017096
  • GC01P017104
  • GC01P016750
  • GC01P016746
  • GC01P016751
  • GC01P016755
  • GC01P016758
  • GC01P016760
  • GC01P016762
  • GC01P016764

Summaries for CROCCP4 Gene

GeneCards Summary for CROCCP4 Gene

CROCCP4 (Ciliary Rootlet Coiled-Coil, Rootletin Pseudogene 4) is a Pseudogene.

Additional gene information for CROCCP4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CROCCP4 Gene

Genomics for CROCCP4 Gene

GeneHancer (GH) Regulatory Elements for CROCCP4 Gene

Promoters and enhancers for CROCCP4 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J016739 Promoter/Enhancer 0.7 Ensembl dbSUPER 650.7 +0.1 121 1.2 CROCC CROCCP4 PIR38064 RNU1-4 ENSG00000282740
GH01J016741 Enhancer 0.2 dbSUPER 650.7 +0.8 845 0.2 CROCC CROCCP4 RNU1-4 PIR38064 PIR43378 ENSG00000282740
GH01J016706 Enhancer 1.4 Ensembl ENCODE dbSUPER 4.8 -33.1 -33065 2.2 ATF1 ZNF133 SIN3A GLI4 ZNF2 ZBTB7B ZNF48 ZNF121 GLIS2 ZNF213 ZBTB17 CROCC CROCCP3 LINC01772 SPEN NECAP2 RCC2 MST1L ESPNP CROCCP4
GH01J016748 Enhancer 0.7 dbSUPER 0.4 +8.9 8854 1 GATAD2A AFF1 RFX1 MTA2 L3MBTL2 ZBTB2 CEBPB CEBPG DPF2 ZNF48 ENSG00000282740 PIR43378 CROCC CROCCP4 RNU1-4
GH01J016749 Enhancer 0.7 Ensembl ENCODE dbSUPER 0.4 +10.2 10239 1.2 RB1 ENSG00000282740 PIR43378 CROCC CROCCP4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CROCCP4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CROCCP4 Gene

Genomic Locations for CROCCP4 Gene
10,689 bases
Plus strand
738 bases
Plus strand

Genomic View for CROCCP4 Gene

Genes around CROCCP4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CROCCP4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CROCCP4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CROCCP4 Gene

Function for CROCCP4 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CROCCP4 Gene

Localization for CROCCP4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CROCCP4 Gene

Pathways & Interactions for CROCCP4 Gene

SuperPathways for CROCCP4 Gene

No Data Available

Interacting Proteins for CROCCP4 Gene

Gene Ontology (GO) - Biological Process for CROCCP4 Gene


No data available for Pathways by source and SIGNOR curated interactions for CROCCP4 Gene

Drugs & Compounds for CROCCP4 Gene

No Compound Related Data Available

Transcripts for CROCCP4 Gene

mRNA/cDNA for CROCCP4 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CROCCP4 Gene

No ASD Table

Relevant External Links for CROCCP4 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for CROCCP4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CROCCP4 Gene

mRNA differential expression in normal tissues according to GTEx for CROCCP4 Gene

This gene is overexpressed in Testis (x5.3).

NURSA nuclear receptor signaling pathways regulating expression of CROCCP4 Gene:

genes like me logo Genes that share expression patterns with CROCCP4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CROCCP4 Gene

Orthologs for CROCCP4 Gene

Evolution for CROCCP4 Gene

Gene Tree for CROCCP4 (if available)
Gene Tree for CROCCP4 (if available)

No data available for Orthologs for CROCCP4 Gene

Paralogs for CROCCP4 Gene

No data available for Paralogs for CROCCP4 Gene

Variants for CROCCP4 Gene

Additional Variant Information for CROCCP4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CROCCP4 Gene

Disorders for CROCCP4 Gene

No disorders were found for CROCCP4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CROCCP4 Gene

Publications for CROCCP4 Gene

  1. RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination. (PMID: 29117863) Choudhury NR … Michlewski G (BMC biology 2017) 3 58

Products for CROCCP4 Gene

Sources for CROCCP4 Gene

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