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Aliases for CPSF1P1 Gene

Aliases for CPSF1P1 Gene

  • Cleavage And Polyadenylation Specific Factor 1 Pseudogene 1 2 3 5
  • Cleavage And Polyadenylation Specific Factor 1, 160kDa Pseudogene 1 2 3
  • DJ90G24.5 3

External Ids for CPSF1P1 Gene

Previous GeneCards Identifiers for CPSF1P1 Gene

  • GC22P029360
  • GC22U900013
  • GC22P030995
  • GC22P032666
  • GC22P015623

Summaries for CPSF1P1 Gene

GeneCards Summary for CPSF1P1 Gene

CPSF1P1 (Cleavage And Polyadenylation Specific Factor 1 Pseudogene 1) is a Pseudogene.

Additional gene information for CPSF1P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CPSF1P1 Gene

Genomics for CPSF1P1 Gene

GeneHancer (GH) Regulatory Elements for CPSF1P1 Gene

Promoters and enhancers for CPSF1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22I032206 Enhancer 0.8 Ensembl ENCODE 5 -62.4 -62408 1.4 HDGF CTCF ZNF654 ZNF521 ZBTB6 ZNF133 RAD21 GATA3 ZNF776 ZNF580 RFPL2 SLC5A4-AS1 PRR14L DEPDC5 SFI1 CPSF1P1
GH22I032266 Enhancer 0.8 Ensembl ENCODE 0.8 -3.1 -3125 0.5 CTCF ZNF654 NFIA TRIM22 REST BATF RAD21 YY1 NFIC ZNF692 ENSG00000234626 RFPL3 LOC339666 IGLVIVOR22-2 ENSG00000241954 RFPL3S LOC100422292 SLC5A1 CPSF1P1 RFPL2
GH22I032254 Promoter/Enhancer 0.7 EPDnew ENCODE 0.4 -14.0 -14017 1.1 SLC5A4 CPSF1P1 RFPL2 SLC5A4-AS1
GH22I032244 Enhancer 0.7 ENCODE 0.3 -24.2 -24249 1.2 SOX13 SAP130 RARA NR2F6 HOMEZ MIXL1 GATAD2A SOX5 RXRA FOXA3 CPSF1P1 RFPL2 SLC5A4-AS1 SLC5A4
GH22I032248 Enhancer 0.4 ENCODE 0.3 -20.3 -20282 1.1 GATAD2A MLX HNF4A CPSF1P1 SLC5A4-AS1 RFPL2 SLC5A4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around CPSF1P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for CPSF1P1 Gene

Genomic Locations for CPSF1P1 Gene
chr22:32,269,381-32,273,194
(GRCh38/hg38)
Size:
3,814 bases
Orientation:
Plus strand
chr22:32,665,368-32,669,181
(GRCh37/hg19)

Genomic View for CPSF1P1 Gene

Genes around CPSF1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CPSF1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CPSF1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CPSF1P1 Gene

Proteins for CPSF1P1 Gene

Post-translational modifications for CPSF1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for CPSF1P1 Gene

Domains & Families for CPSF1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CPSF1P1 Gene

Function for CPSF1P1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CPSF1P1 Gene

Localization for CPSF1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for CPSF1P1 Gene

Pathways & Interactions for CPSF1P1 Gene

SuperPathways for CPSF1P1 Gene

No Data Available

Interacting Proteins for CPSF1P1 Gene

Gene Ontology (GO) - Biological Process for CPSF1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CPSF1P1 Gene

Drugs & Compounds for CPSF1P1 Gene

No Compound Related Data Available

Transcripts for CPSF1P1 Gene

mRNA/cDNA for CPSF1P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for CPSF1P1 Gene

No ASD Table

Relevant External Links for CPSF1P1 Gene

GeneLoc Exon Structure for
CPSF1P1
ECgene alternative splicing isoforms for
CPSF1P1

Expression for CPSF1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for CPSF1P1 Gene

mRNA expression in normal human tissues for CPSF1P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of CPSF1P1 Gene:

CPSF1P1
genes like me logo Genes that share expression patterns with CPSF1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CPSF1P1 Gene

Orthologs for CPSF1P1 Gene

Evolution for CPSF1P1 Gene

ENSEMBL:
Gene Tree for CPSF1P1 (if available)
TreeFam:
Gene Tree for CPSF1P1 (if available)

No data available for Orthologs for CPSF1P1 Gene

Paralogs for CPSF1P1 Gene

No data available for Paralogs for CPSF1P1 Gene

Variants for CPSF1P1 Gene

Additional Variant Information for CPSF1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CPSF1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CPSF1P1 Gene

Disorders for CPSF1P1 Gene

Additional Disease Information for CPSF1P1

Genetic Association Database
(GAD)

No disorders were found for CPSF1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for CPSF1P1 Gene

Publications for CPSF1P1 Gene

  1. Genome-wide association reveals genetic effects on human Aβ42 and τ protein levels in cerebrospinal fluids: a case control study. (PMID: 20932310) Han MR … Alzheimer's Disease Neuroimaging Initiative (BMC neurology 2010) 44 58

Products for CPSF1P1 Gene

Sources for CPSF1P1 Gene

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