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Aliases for CPHXL Gene

Aliases for CPHXL Gene

  • Cytoplasmic Polyadenylated Homeobox Like 2 3 3 5

External Ids for CPHXL Gene

Summaries for CPHXL Gene

GeneCards Summary for CPHXL Gene

CPHXL (Cytoplasmic Polyadenylated Homeobox Like) is a Protein Coding gene. An important paralog of this gene is ENSG00000284484.

Additional gene information for CPHXL Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for CPHXL Gene

Genomics for CPHXL Gene

GeneHancer (GH) Regulatory Elements for CPHXL Gene

Promoters and enhancers for CPHXL Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J075732 Enhancer 0.8 Ensembl ENCODE 650.7 -0.9 -947 1.7 HDAC1 MEIS2 KLF1 ZNF680 CBFA2T3 ZNF217 ZFHX2 GATA3 CTBP1 EGR1 CPHXL ADAT1 TMEM170A GC16P075766 TERF2IP
GH16J075727 Enhancer 0.7 ENCODE 0.4 +5.3 5302 0.2 ELF3 SOX13 FOXA2 SAP130 ZNF644 RARA NR2F6 HOMEZ GATAD2A SOX5 CPHXL ATP5PBP7 TERF2IP
GH16J075764 Enhancer 0.7 ENCODE 0.3 -31.6 -31618 0.2 SIX4 CTCF ATF1 RB1 SAP130 CEBPG ZNF384 RAD21 CC2D1A ZNF121 BCAR1 GC16P075766 CPHXL
GH16J075753 Enhancer 0.5 ENCODE 0.3 -21.6 -21633 1.1 GATA3 HLF CEBPA CEBPB CEBPG MNT GC16P075766 CPHXL TERF2IP
GH16J075750 Enhancer 0.3 ENCODE 0.4 -18.0 -18038 0.2 POLR2A ADAT1 TERF2IP CPHXL GC16P075766
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around CPHXL on UCSC Golden Path with GeneCards custom track

Genomic Locations for CPHXL Gene

Genomic Locations for CPHXL Gene
chr16:75,714,024-75,732,740
(GRCh38/hg38)
Size:
18,717 bases
Orientation:
Minus strand

Genomic View for CPHXL Gene

Genes around CPHXL on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
CPHXL Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for CPHXL Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for CPHXL Gene

Proteins for CPHXL Gene

  • Protein details for CPHXL Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A1W2PPM1-A0A1W2PPM1_HUMAN
    Recommended name:
    Cytoplasmic polyadenylated homeobox-like
    Protein Accession:
    A0A1W2PPM1

    Protein attributes for CPHXL Gene

    Size:
    405 amino acids
    Molecular mass:
    45714 Da
    Quaternary structure:
    No Data Available

neXtProt entry for CPHXL Gene

Post-translational modifications for CPHXL Gene

No Post-translational modifications

Other Protein References for CPHXL Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for CPHXL Gene

Domains & Families for CPHXL Gene

Gene Families for CPHXL Gene

Human Protein Atlas (HPA):
  • Predicted intracellular proteins

Protein Domains for CPHXL Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with CPHXL: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for CPHXL Gene

Function for CPHXL Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for CPHXL Gene

Localization for CPHXL Gene

Gene Ontology (GO) - Cellular Components for CPHXL Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with CPHXL: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for CPHXL Gene

Pathways & Interactions for CPHXL Gene

SuperPathways for CPHXL Gene

No Data Available

Interacting Proteins for CPHXL Gene

Gene Ontology (GO) - Biological Process for CPHXL Gene

None

No data available for Pathways by source and SIGNOR curated interactions for CPHXL Gene

Drugs & Compounds for CPHXL Gene

No Compound Related Data Available

Transcripts for CPHXL Gene

mRNA/cDNA for CPHXL Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for CPHXL Gene

No ASD Table

Relevant External Links for CPHXL Gene

GeneLoc Exon Structure for
CPHXL
ECgene alternative splicing isoforms for
CPHXL

Expression for CPHXL Gene

NURSA nuclear receptor signaling pathways regulating expression of CPHXL Gene:

CPHXL
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for CPHXL Gene

Orthologs for CPHXL Gene

Evolution for CPHXL Gene

ENSEMBL:
Gene Tree for CPHXL (if available)
TreeFam:
Gene Tree for CPHXL (if available)

No data available for Orthologs for CPHXL Gene

Paralogs for CPHXL Gene

Paralogs for CPHXL Gene

genes like me logo Genes that share paralogs with CPHXL: view

Variants for CPHXL Gene

Additional Variant Information for CPHXL Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
CPHXL

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for CPHXL Gene

Disorders for CPHXL Gene

No disorders were found for CPHXL Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for CPHXL Gene

Publications for CPHXL Gene

  1. A family history of DUX4: phylogenetic analysis of DUXA, B, C and Duxbl reveals the ancestral DUX gene. (PMID: 21110847) Leidenroth A … Hewitt JE (BMC evolutionary biology 2010) 2 3 58
  2. Novel PRD-like homeodomain transcription factors and retrotransposon elements in early human development. (PMID: 26360614) Töhönen V … Kere J (Nature communications 2015) 3 58

Products for CPHXL Gene

Sources for CPHXL Gene

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